RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 C2orf76Q3KRA6 126 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 SERPINA12Q8IW75 414 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF444Q8N0Y2 327 aaPredicted RBP4.63□□□□□ -1.67
LINC00557-201ENST00000563184 C8orf46Q8TAG6 207 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.63□□□□□ -1.67
LINC00557-201ENST00000563184 HAS2Q92819 552 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 GUCD1Q96NT3 240 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 AGAP3Q96P47 875 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 LGMNQ99538 433 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 SSX3Q99909 188 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 FOXA2Q9Y261 457 aaPredicted RBP4.63□□□□□ -1.67
LINC00557-201ENST00000563184 SH3GLB1Q9Y371 365 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 RNF215Q9Y6U7 377 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 ZHX2Q9Y6X8 837 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 PCNX3Q9H6A9 2034 aa4.63□□□□□ -1.67
LINC00557-201ENST00000563184 SHISA7A6NL88 538 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 TFECO14948 347 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 CHRNGP07510 517 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 VDRP11473 427 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 ANPEPP15144 967 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 B4GALT1P15291 398 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 CCR4P51679 360 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 ABCE1P61221 599 aaKnown RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 NPRL3Q12980 569 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 LCP2Q13094 533 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 PPP2R5CQ13362 524 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 MSLNQ13421 630 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 KIAA0141Q14154 515 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 GK2Q14410 553 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 MLF2Q15773 248 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 UPP1Q16831 310 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 TAF1BQ53T94 588 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 FAAP20Q6NZ36 180 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 DOK6Q6PKX4 331 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 OR4N5Q8IXE1 308 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 ELMOD1Q8N336 334 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 MAPK1IP1LQ8NDC0 245 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 OR52B6Q8NGF0 335 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 LIPHQ8WWY8 451 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 CABLES2Q9BTV7 478 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 S100A14Q9HCY8 104 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 FAM212BQ9NTI7 297 aaPredicted RBP4.62□□□□□ -1.67
LINC00557-201ENST00000563184 KCNK6Q9Y257 313 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 OR1A2Q9Y585 309 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 UMODL1Q5DID0 1318 aa4.62□□□□□ -1.67
LINC00557-201ENST00000563184 IGHV4-30-2A0A087WSY4 118 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 NTN3O00634 580 aaPredicted RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PSMD3O43242 534 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 SORBS2O94875 1100 aaKnown RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 OLFM2O95897 454 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CGAP01215 116 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 EPOP01588 193 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM49P0CI25 452 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM49CP0CI26 452 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CPA3P15088 417 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 VEGFCP49767 419 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 ERVK-16P61578 105 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 GABPAQ06546 454 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PDE7AQ13946 482 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CAPN13Q6MZZ7 669 aaPredicted RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 NEPROQ6NW34 567 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 RAPH1Q70E73 1250 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 SSC4DQ8WTU2 575 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PRCCQ92733 491 aaPredicted RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF274Q96GC6 653 aaPredicted RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CCDC43Q96MW1 224 aaKnown RBP4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PRAM1Q96QH2 718 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 VGLL1Q99990 258 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PINK1Q9BXM7 581 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 CYP39A1Q9NYL5 469 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 PLEK2Q9NYT0 353 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 SNX5Q9Y5X3 404 aa4.61□□□□□ -1.67
LINC00557-201ENST00000563184 IGHV3OR16-10A0A075B7F0 116 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 IGKV3D-15A0A087WSY6 115 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 TRAFD1O14545 582 aaPredicted RBP4.6□□□□□ -1.67
LINC00557-201ENST00000563184 INPP4BO15327 924 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 VEGFDO43915 354 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 CPNE6O95741 557 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 PNPP00491 289 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 THEGLP0DJG4 465 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 CYP3A5P20815 502 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 GLRA1P23415 457 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 PKLRP30613 574 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 GIT2Q14161 759 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 GCKRQ14397 625 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 RFTN2Q52LD8 501 aaPredicted RBP4.6□□□□□ -1.67
LINC00557-201ENST00000563184 EPC2Q52LR7 807 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 TEX35Q5T0J7 233 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 SNRNP48Q6IEG0 339 aaKnown RBP4.6□□□□□ -1.67
LINC00557-201ENST00000563184 PLBD1Q6P4A8 553 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 KCNMB4Q86W47 210 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 CARM1Q86X55 608 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 WDR49Q8IV35 697 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 STHQ8IWL8 128 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF440Q8IYI8 595 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms