RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 USP30Q70CQ3 517 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 TSEN54Q7Z6J9 526 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SLC30A8Q8IWU4 369 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 LZICQ8WZA0 190 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SLC6A20Q9NP91 592 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 MRPS30Q9NP92 439 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 CLDND1Q9NY35 253 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 KIF17Q9P2E2 1029 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 BLOC1S6Q9UL45 172 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 NCKAP1Q9Y2A7 1128 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SNX8Q9Y5X2 465 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SNRNP200O75643 2136 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 MYO10Q9HD67 2058 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 A0A0A6YYD5 115 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 PRAMEF33A0A0G2JMD5 474 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SCAMP1O15126 338 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 ABCB7O75027 752 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 SERPIND1P05546 499 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 JUNBP17275 347 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 RRM2P31350 389 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 FRKP42685 505 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 MANFP55145 182 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 PCBP3P57721 371 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 TRA2BP62995 288 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 ABATP80404 500 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 IL1RL1Q01638 556 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 RAPSNQ13702 412 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 NEDD8Q15843 81 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 CRB2Q5IJ48 1285 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SAXO2Q658L1 398 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 OR4C11Q6IEV9 310 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 LAIR2Q6ISS4 152 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 ZC3H7AQ8IWR0 971 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 NEURL3Q96EH8 262 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 TUBA1CQ9BQE3 449 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 AICDAQ9GZX7 198 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 CXorf21Q9HAI6 301 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 KRT84Q9NSB2 600 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 NDUFAF4Q9P032 175 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 PCDHGB3Q9Y5G1 929 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 HEBP2Q9Y5Z4 205 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 DGKBQ9Y6T7 804 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 POM121BA6NF01 834 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 M0QX08 132 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 IFNA14P01570 189 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 CYP4B1P13584 511 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 AGXTP21549 392 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 DRD1P21728 446 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 PEBP1P30086 187 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 GRK3P35626 688 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 BCL6P41182 706 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 SSR2P43308 183 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 CLK3P49761 638 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 CLDN2P57739 230 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ZIC1Q15915 447 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TMEM35AQ53FP2 167 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ERI1Q8IV48 349 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 FAM20CQ8IXL6 584 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 AMER3Q8N944 861 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ATG16L2Q8NAA4 619 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 DENND6BQ8NEG7 585 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TEFMQ96QE5 360 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 ZNF347Q96SE7 839 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 KIR3DX1Q9H7L2 352 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TMEM184CQ9NVA4 438 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TEX10Q9NXF1 929 aaPredicted RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 C5AR2Q9P296 337 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 PIAS3Q9Y6X2 628 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 HSPE1-MOB4S4R3N1 261 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 A0A0G2JN53 185 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 LRIT2A6NDA9 550 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 SLC1A7O00341 560 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ADAMDEC1O15204 470 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 KDM1AO60341 852 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TNFRSF1BP20333 461 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 GSTM2P28161 218 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 LTBRP36941 435 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 PLA2G16P53816 162 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 MRPS21P82921 87 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 IL5RAQ01344 420 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 CDK5R2Q13319 367 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 SIM2Q14190 667 aaPredicted RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 NFATC4Q14934 902 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 TTC29Q8NA56 475 aaPredicted RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 OR2L3Q8NG85 312 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ZNF420Q8TAQ5 688 aaPredicted RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 OR1E3Q8WZA6 343 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 ZNF566Q969W8 418 aa9.33□□□□□ -0.92
SMG1-205ENST00000561947 EXOSC8Q96B26 276 aaKnown RBP9.33□□□□□ -0.92
SMG1-205ENST00000561947 ZBED6CLQ96FA7 236 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms