RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CD22P20273 847 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 CERS1P27544 350 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 SERPINB3P29508 390 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 HNRNPH1P31943 449 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 CASRP41180 1078 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 HK2P52789 917 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 LIM2P55344 173 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 TRA2BP62995 288 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 COL9A2Q14055 689 aaPredicted RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 SYT16Q17RD7 645 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 GALNTL6Q49A17 601 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 NXNQ6DKJ4 435 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 ZNF517Q6ZMY9 492 aaPredicted RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 CPEB2Q7Z5Q1 589 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 CA13Q8N1Q1 262 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 FAM76AQ8TAV0 307 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 TLCD1Q96CP7 247 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 METTL2AQ96IZ6 378 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 TUBB6Q9BUF5 446 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 SLC25A23Q9BV35 468 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 ING2Q9H160 280 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 EPS8L2Q9H6S3 715 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 AKIRIN1Q9H9L7 192 aaPredicted RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 P4HTMQ9NXG6 502 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 DAPP1Q9UN19 280 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 WBP11Q9Y2W2 641 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 TMED5Q9Y3A6 229 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 HEMK1Q9Y5R4 338 aaPredicted RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 RP1P56715 2156 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 CEP250Q9BV73 2442 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 C1orf226A1L170 272 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 VSTM2BA6NLU5 285 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 H3BMH7 237 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 RTCAO00442 366 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 HPP00738 406 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 FGF4P08620 206 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 NR1D1P20393 614 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 ASMTP46597 345 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 PLIN5Q00G26 463 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 EEF1A2Q05639 463 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 BTBD16Q32M84 506 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 ADPRMQ3LIE5 342 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 AGAP7PQ5VUJ5 663 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 HLA-DQA1Q5Y7H0 255 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 CLEC6AQ6EIG7 209 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 OR52E8Q6IFG1 317 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 LCN10Q6JVE6 187 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 QSOX2Q6ZRP7 698 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 ACAD11Q709F0 780 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 PRSS41Q7RTY9 318 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 COMMD6Q7Z4G1 85 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 R3HCC1LQ7Z5L2 792 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 METTL4Q8N3J2 472 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 C1orf52Q8N6N3 182 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 FNDC5Q8NAU1 212 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 PLPP5Q8NEB5 264 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 OR4K14Q8NGD5 310 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 OR5T3Q8NGG3 340 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 TWIST2Q8WVJ9 160 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 ARL8AQ96BM9 186 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 AGAP4Q96P64 663 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 BBS4Q96RK4 519 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 ZBTB18Q99592 522 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 MRPL1Q9BYD6 325 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 ALOXE3Q9BYJ1 711 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 VN1R1Q9GZP7 353 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 DDX31Q9H8H2 851 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 KCNK13Q9HB14 408 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 PRDM7Q9NQW5 492 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 C1orf109Q9NX04 203 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 MCM8Q9UJA3 840 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 FBXL4Q9UKA2 621 aa10.1□□□□□ -0.79
TPM1-229ENST00000561242 MRPS2Q9Y399 296 aaKnown RBP10.1□□□□□ -0.79
TPM1-229ENST00000561242 ASXL3Q9C0F0 2248 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 IGLV3-12A0A075B6K2 115 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 DYTNA2CJ06 578 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 A8MUA0 341 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 A8MUI8 341 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PPP6CO00743 305 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PLPP1O14494 284 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 SKAP2O75563 359 aaPredicted RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 ERAL1O75616 437 aaKnown RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 GBAP04062 536 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 SMIM10L1P0DMW3 83 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 KITP10721 976 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 DRD2P14416 443 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 CHN1P15882 459 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 F8A1P23610 371 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 NTSP30990 170 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 MPIP34949 423 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PGDP52209 483 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 HMGCS1Q01581 520 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 C2orf80Q0P641 193 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ATP1A4Q13733 1029 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 RUNX2Q13950 521 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 E2F2Q14209 437 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PDCD2Q16342 344 aaPredicted RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 SFT2D3Q587I9 215 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms