RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 VPS50Q96JG6 964 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 IMMP1LQ96LU5 166 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 ZSCAN31Q96LW9 406 aaPredicted RBP3.49□□□□□ -1.85
HERC1-211ENST00000560983 CFAP57Q96MR6 1250 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 PSKH2Q96QS6 385 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 NPAS2Q99743 824 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 OLFM1Q99784 485 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 MACROD1Q9BQ69 325 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 BEX2Q9BXY8 128 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 REG4Q9BYZ8 158 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 SLC39A8Q9C0K1 460 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 CHRNA10Q9GZZ6 450 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 VPS16Q9H269 839 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 FAM83DQ9H4H8 585 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 PNPLA3Q9NST1 481 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 LMBRD1Q9NUN5 540 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 ZNF701Q9NV72 531 aaPredicted RBP3.49□□□□□ -1.85
HERC1-211ENST00000560983 PNPOQ9NVS9 261 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 TUBA8Q9NY65 449 aaPredicted RBP3.49□□□□□ -1.85
HERC1-211ENST00000560983 PSMD13Q9UNM6 376 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 ALG6Q9Y672 507 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 MORC2Q9Y6X9 1032 aaPredicted RBP3.49□□□□□ -1.85
HERC1-211ENST00000560983 SEC16AO15027 2179 aa3.49□□□□□ -1.85
HERC1-211ENST00000560983 LOC102723996A0A087X1L8 192 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 A0A0J9YYE9 177 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 A8MUI8 341 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 H3BQV1 296 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 BTN3A1O00481 513 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CES2O00748 559 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 MAP2K7O14733 419 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 PMM2O15305 246 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 HS6ST1O60243 411 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 GPRIN2O60269 458 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 MTX2O75431 263 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 PDE9AO76083 593 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 SLC25A14O95258 325 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 TRBC1P01850 177 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 FTLP02792 175 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 NPSP0C0P6 89 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ACVR2AP27037 513 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 HALP42357 657 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 GABRB2P47870 512 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CARSP49589 748 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 COMPP49747 757 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 RAB28P51157 221 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 EFNA3P52797 238 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 GCNT1Q02742 428 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 SLC10A7Q0GE19 358 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 SLC39A14Q15043 492 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 DEFB110Q30KQ9 67 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CCDC14Q49A88 953 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 MIDNQ504T8 468 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ACER2Q5QJU3 275 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 C6orf52Q5T4I8 152 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ARHGAP11AQ6P4F7 1023 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 FAM173BQ6P4H8 233 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 DAAM2Q86T65 1068 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ZDHHC17Q8IUH5 632 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 PAF1Q8N7H5 531 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 C1orf131Q8NDD1 294 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 OR5M9Q8NGP3 310 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 C16orf52Q8NHV5 167 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 STT3BQ8TCJ2 826 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CENPIQ92674 756 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 SLC35C1Q96A29 364 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ZMYND19Q96E35 227 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 CELF6Q96J87 481 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 NUDCD1Q96RS6 583 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CCL19Q99731 98 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 WACQ9BTA9 647 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CRB3Q9BUF7 120 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 CINPQ9BW66 212 aaPredicted RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 NAA15Q9BXJ9 866 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 GTPBP4Q9BZE4 634 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 ZNF700Q9H0M5 742 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ESRP2Q9H6T0 727 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 KIR3DX1Q9H7L2 352 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 TXLNGQ9NUQ3 528 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 TMEM160Q9NX00 188 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 ELOVL5Q9NYP7 299 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 C3orf18Q9UK00 162 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 NXT1Q9UKK6 140 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 NDRG4Q9ULP0 352 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 DOCK10Q96BY6 2186 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
HERC1-211ENST00000560983 VWFP04275 2813 aa3.48□□□□□ -1.85
HERC1-211ENST00000560983 SPTBP11277 2137 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 WNK1Q9H4A3 2382 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 IGLV3-12A0A075B6K2 115 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 A0A1B0GX78 115 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 RGSL1A5PLK6 1076 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 BECN2A8MW95 431 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 EIF3CLB5ME19 914 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 NPIPA2E9PIF3 369 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 NPIPA3F8WFD2 350 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 POLR2DO15514 142 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 NME2P1O60361 137 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 CDC40O60508 579 aaKnown RBP eCLIP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms