RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 IL1RL2Q9HB29 575 aa17.27■□□□□ 0.36
TRIP4-211ENST00000560920 IKZF3Q9UKT9 509 aa17.27■□□□□ 0.36
TRIP4-211ENST00000560920 A0A0G2JN53 185 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 AQP7O14520 342 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 ZNF354AO60765 605 aaPredicted RBP17.26■□□□□ 0.35
TRIP4-211ENST00000560920 FOSL1P15407 271 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 CXCR5P32302 372 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 KIR2DL3P43628 341 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 ADAM8P78325 824 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 SLC13A2Q13183 592 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 SLC25A35Q3KQZ1 300 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 GK5Q6ZS86 529 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 TMPRSS11BQ86T26 416 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 CNPPD1Q9BV87 410 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 NPLQ9BXD5 320 aaPredicted RBP17.26■□□□□ 0.35
TRIP4-211ENST00000560920 ADAP2Q9NPF8 381 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 CRIM1Q9NZV1 1036 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 SLC22A14Q9Y267 594 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 DYRK1BQ9Y463 629 aa17.26■□□□□ 0.35
TRIP4-211ENST00000560920 FLNAP21333 2647 aaKnown RBP17.26■□□□□ 0.35
TRIP4-211ENST00000560920 HRNRQ86YZ3 2850 aaPredicted RBP17.26■□□□□ 0.35
TRIP4-211ENST00000560920 VPS13CQ709C8 3753 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 A0A1B0GTL3 188 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 CLDN4O14493 209 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 SUSD5O60279 629 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 WDR1O75083 606 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 DRD2P14416 443 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 DNASE1P24855 282 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 HNRNPH1P31943 449 aaKnown RBP17.25■□□□□ 0.35
TRIP4-211ENST00000560920 HK2P52789 917 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 BMPR2Q13873 1038 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 ELAVL1Q15717 326 aaKnown RBP17.25■□□□□ 0.35
TRIP4-211ENST00000560920 HYAL4Q2M3T9 481 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 C1orf185Q5T7R7 199 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 SBSNQ6UWP8 590 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 HSDL2Q6YN16 418 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 RTL4Q6ZR62 310 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 CDC20BQ86Y33 519 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 TMEM132CQ8N3T6 1108 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 ZNF321PQ8N8H1 164 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 NAT8LQ8N9F0 302 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 PTPMT1Q8WUK0 201 aaPredicted RBP17.25■□□□□ 0.35
TRIP4-211ENST00000560920 SLCO2A1Q92959 643 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 MS4A6EQ96DS6 147 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 RMND5BQ96G75 393 aaPredicted RBP17.25■□□□□ 0.35
TRIP4-211ENST00000560920 SEMA4BQ9NPR2 832 aaPredicted RBP17.25■□□□□ 0.35
TRIP4-211ENST00000560920 ACAD8Q9UKU7 415 aa17.25■□□□□ 0.35
TRIP4-211ENST00000560920 MYOCOSA0A1B0GUC4 107 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 ATP6AP2A0A1C7CYW4 349 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 PABPN1LA6NDY0 278 aaKnown RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 SYT5O00445 386 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 ATP6AP2O75787 350 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 ENO2P09104 434 aaPredicted RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CCDC175P0C221 793 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 SAT1P21673 171 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 DNASE1L1P49184 302 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 MAN2A2P49641 1150 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 RAB38P57729 211 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 STXBP1P61764 594 aaKnown RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CCZ1BP86790 482 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CCZ1P86791 482 aaPredicted RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 PDAP1Q13442 181 aaKnown RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CRYMQ14894 314 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 SLC10A1Q14973 349 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 BBS9Q3SYG4 887 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 WDR53Q7Z5U6 358 aaPredicted RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CLNKQ7Z7G1 428 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 ZNF595Q8IYB9 648 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 FAM47BQ8NA70 645 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 GAL3ST3Q96A11 431 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 FAR2Q96K12 515 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 QRFPRQ96P65 431 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 ALPK1Q96QP1 1244 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 TUBA8Q9NY65 449 aaPredicted RBP17.24■□□□□ 0.35
TRIP4-211ENST00000560920 KCNE2Q9Y6J6 123 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 CLCA3PQ9Y6N3 262 aa17.24■□□□□ 0.35
TRIP4-211ENST00000560920 LRIT2A6NDA9 550 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 CYR61O00622 381 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 ENDOUP21128 410 aaKnown RBP17.23■□□□□ 0.35
TRIP4-211ENST00000560920 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 WLSQ5T9L3 541 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 RIPPLY2Q5TAB7 128 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 FAM47EQ6ZV65 393 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 CNTN4Q8IWV2 1026 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 KLHDC8AQ8IYD2 350 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 GOLM1Q8NBJ4 401 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 MORN4Q8NDC4 146 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 SARAFQ96BY9 339 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 MBD6Q96DN6 1003 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 PDLIM5Q96HC4 596 aaKnown RBP17.23■□□□□ 0.35
TRIP4-211ENST00000560920 SGCZQ96LD1 299 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 SACM1LQ9NTJ5 587 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 ALKBH4Q9NXW9 302 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 SLC17A6Q9P2U8 582 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 SPRR3Q9UBC9 169 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 VTI1BQ9UEU0 232 aa17.23■□□□□ 0.35
TRIP4-211ENST00000560920 A6NNC1 897 aa17.22■□□□□ 0.35
TRIP4-211ENST00000560920 ERI3O43414 337 aaKnown RBP17.22■□□□□ 0.35
TRIP4-211ENST00000560920 NRDCO43847 1150 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms