RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 B4DGG1 531 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 TNFRSF21O75509 655 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 PRKD3O94806 890 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 KRT75O95678 551 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SERPINA1P01009 418 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SLC35G6P0C7Q6 338 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SMIM10L1P0DMW3 83 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 CKMT2P17540 419 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 BCKDHBP21953 392 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 UQCRC2P22695 453 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 HOXA6P31267 233 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 KDELR2P33947 212 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 PCGF2P35227 344 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ALDH9A1P49189 494 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 RBBP4Q09028 425 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SLAMF1Q13291 335 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 NKG7Q16617 165 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ENPP6Q6UWR7 440 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 RNF44Q7L0R7 432 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SPRED1Q7Z699 444 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 C17orf82Q86X59 251 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 EPHX4Q8IUS5 362 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 OR8K5Q8NH50 307 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 FBXO30Q8TB52 745 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 RSC1A1Q92681 617 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ZBED6CLQ96FA7 236 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 SMIM10Q96HG1 83 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 FCRL4Q96PJ5 515 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SLC29A1Q99808 456 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ZFYVE21Q9BQ24 234 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 BDH2Q9BUT1 245 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 C9orf16Q9BUW7 83 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DUSP15Q9H1R2 295 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 TMEM38AQ9H6F2 299 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 LYARQ9NX58 379 aaKnown RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 ZNF639Q9UID6 485 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ACOX3O15254 700 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 CLOCKO15516 846 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DEAF1O75398 565 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 STATHP02808 62 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 NTRK1P04629 796 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DCNP07585 359 aaKnown RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 MAGEA2P43356 314 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 LSSP48449 732 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 HNRNPKP61978 463 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■■□ 26.4
SNX1-211ENST00000560829 FOLH1Q04609 750 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 MED21Q13503 144 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 TEAD4Q15561 434 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNX1-211ENST00000560829 TMTC4Q5T4D3 741 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ZBTB49Q6ZSB9 765 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 CLEC4FQ8N1N0 589 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 MAFAQ8NHW3 353 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 UTP15Q8TED0 518 aaKnown RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 GATA6Q92908 595 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 SLC47A1Q96FL8 570 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 PYURFQ96I23 114 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DPH2Q9BQC3 489 aaPredicted RBP12.25□□□□□ -0.45
SNX1-211ENST00000560829 ASPSCR1Q9BZE9 553 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 ROGDIQ9GZN7 287 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 Q9H521 79 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 CXorf36Q9H7Y0 433 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 C1GALT1Q9NS00 363 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 DLGAP2Q9P1A6 1054 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 POMT2Q9UKY4 750 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 V9GYQ6 96 aa12.25□□□□□ -0.45
SNX1-211ENST00000560829 CCDC163A0A0D9SF12 145 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 C7orf72A4D263 438 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 URADA6NGE7 173 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 NUDT7P0C024 238 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 MANFP55145 182 aaKnown RBP12.24□□□□□ -0.45
SNX1-211ENST00000560829 RAB8AP61006 207 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 C16orf72Q14CZ0 275 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 MANEAQ5SRI9 462 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 SAXO2Q658L1 398 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 CBLL1Q75N03 491 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 GALNT4Q8N4A0 578 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 KCT2Q8NC54 265 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 CAMKVQ8NCB2 501 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 C11orf65Q8NCR3 313 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 LMX1AQ8TE12 382 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 EXOSC8Q96B26 276 aaKnown RBP12.24□□□□□ -0.45
SNX1-211ENST00000560829 NEURL3Q96EH8 262 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 MIR1-1HGQ9H1L0 117 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 NTN4Q9HB63 628 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 SIRT3Q9NTG7 399 aaPredicted RBP12.24□□□□□ -0.45
SNX1-211ENST00000560829 RPS6KA6Q9UK32 745 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 OAZ3Q9UMX2 235 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
SNX1-211ENST00000560829 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
SNX1-211ENST00000560829 A0A0J9YVX5 310 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 A0A1W2PR48 441 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 LILRA5A6NI73 299 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SAC3D1A6NKF1 404 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 LMO7DNF2Z398 122 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 UPK1AO00322 258 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SOCS2O14508 198 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms