RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 CPAMD8Q8IZJ3 1885 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 RNF175Q8N4F7 328 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
IDH3A-219ENST00000560414 FAR1Q8WVX9 515 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF354BQ96LW1 612 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 TAAR6Q96RI8 345 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 PAFAH2Q99487 392 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 NPLQ9BXD5 320 aaPredicted RBP13.77□□□□□ -0.21
IDH3A-219ENST00000560414 RNF32Q9H0A6 362 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 TSPYL1Q9H0U9 437 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 ANKRD10Q9NXR5 420 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 CPSF2Q9P2I0 782 aaKnown RBP13.77□□□□□ -0.21
IDH3A-219ENST00000560414 NFU1Q9UMS0 254 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
IDH3A-219ENST00000560414 TGFBR3LH3BV60 316 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
IDH3A-219ENST00000560414 E2F3O00716 465 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 CDK2AP1O14519 115 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 TGFB1P01137 390 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 EPB42P16452 691 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 MTTPP55157 894 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 LIM2P55344 173 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 RAB38P57729 211 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 SETDB1Q15047 1291 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 MEP1AQ16819 746 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 MED27Q6P2C8 311 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 KLC3Q6P597 504 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 FAM180AQ6UWF9 173 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 ST6GALNAC3Q8NDV1 305 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 OR7G3Q8NG95 312 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 ELP5Q8TE02 316 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 PSMG3-AS1Q96PY0 264 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 SERINC2Q96SA4 455 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 CSF3RQ99062 836 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 CDCP1Q9H5V8 836 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 PRTFDC1Q9NRG1 225 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 ANGPTL3Q9Y5C1 460 aa13.76□□□□□ -0.21
IDH3A-219ENST00000560414 POLEQ07864 2286 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 A0A088AWK7 358 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 MYOCOSA0A1B0GUC4 107 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SAGE2PA6NJ88 616 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SAP18O00422 153 aaKnown RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 KLK8O60259 260 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 PRAMEF2O60811 474 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SIX3O95343 332 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF10P21506 573 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 PPP2R1BP30154 601 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 CD96P40200 585 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 MAGEA12P43365 314 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ALDH18A1P54886 795 aaKnown RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 TUBA3CQ13748 450 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 DDX39BQ13838 428 aaKnown RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 TECRLQ5HYJ1 363 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 TUBA3EQ6PEY2 450 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 CLNKQ7Z7G1 428 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 MYLK4Q86YV6 388 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SCUBE1Q8IWY4 988 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 LAS2Q8IYD9 372 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SLC5A8Q8N695 610 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 NFAM1Q8NET5 270 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SUN3Q8TAQ9 357 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 DCAKDQ8WVC6 231 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 UBE2E3Q969T4 207 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ISL2Q96A47 359 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SIGLEC12Q96PQ1 595 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 GRIP2Q9C0E4 1043 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 TSPAN10Q9H1Z9 355 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 OR51B5Q9H339 312 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 COPS7BQ9H9Q2 264 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 PNO1Q9NRX1 252 aaKnown RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 OLAHQ9NV23 265 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ERRFI1Q9UJM3 462 aaPredicted RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 DAPP1Q9UN19 280 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 CLDN16Q9Y5I7 305 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 IKBKGQ9Y6K9 419 aa13.75□□□□□ -0.21
IDH3A-219ENST00000560414 SPTAN1Q13813 2472 aaKnown RBP13.75□□□□□ -0.21
IDH3A-219ENST00000560414 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 GABRR3A8MPY1 467 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 TRIM49D1C9J1S8 452 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 CYR61O00622 381 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 CLDN4O14493 209 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 MYO1DO94832 1006 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 EDN3P14138 238 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 ATP5A1P25705 553 aaKnown RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SERPINB9P50453 376 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 TAS2R50P59544 299 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 PMP22Q01453 160 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 PCDH1Q08174 1060 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms