RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PTCHD1Q96NR3 888 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 TIMM29Q9BSF4 260 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 FNDC11Q9BVV2 318 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 WNT16Q9UBV4 365 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 STOML2Q9UJZ1 356 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 RARRES3Q9UL19 164 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SESN1Q9Y6P5 492 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 CNOT1A5YKK6 2376 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SRCAPQ6ZRS2 3230 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 ANKRD33BA6NCL7 494 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 CER1O95813 267 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 PDYNP01213 254 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 HIST1H2ABP04908 130 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 MS4A2Q01362 244 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SPANXN4Q5MJ08 99 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 HIST3H2AQ7L7L0 130 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 HUS1BQ8NHY5 278 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 HIST1H2ACQ93077 130 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 RELTQ969Z4 430 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 JSRP1Q96MG2 331 aaPredicted RBP10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 FAM129BQ96TA1 746 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 OR8D2Q9GZM6 311 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 GAREM1Q9H706 876 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 NOTOA8MTQ0 251 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 MYL12BO14950 172 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 SLC22A1O15245 554 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 UGT2B11O75310 529 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TFPIP10646 304 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 AZGP1P25311 298 aaKnown RBP10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 LARS2Q15031 903 aaKnown RBP10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 PPP1R3AQ16821 1122 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 CTSL3PQ5NE16 218 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 C1orf189Q5VU69 101 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 NOXRED1Q6NXP6 359 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 FRMD1Q8N878 549 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 DENND6BQ8NEG7 585 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 BIRC7Q96CA5 298 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 INSM2Q96T92 566 aaPredicted RBP10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 CHCHD6Q9BRQ6 235 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 EHD1Q9H4M9 534 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 OCEL1Q9H607 264 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 FGF22Q9HCT0 170 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 MKS1Q9NXB0 559 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TRPS1Q9UHF7 1281 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 PTGDR2Q9Y5Y4 395 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TMEM202A6NGA9 273 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 E7EQ34 232 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 BTN3A3O00478 584 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 EMX2Q04743 252 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 GK3PQ14409 553 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 PTGR1Q14914 329 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 COLEC12Q5KU26 742 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 IER5LQ5T953 404 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 FOXB2Q5VYV0 432 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 CASP12Q6UXS9 341 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 ARMC8Q8IUR7 673 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 LILRA3Q8N6C8 439 aaPredicted RBP10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 KIAA1143Q96AT1 154 aaPredicted RBP10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TADA1Q96BN2 335 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 LRRC58Q96CX6 371 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 DUSP23Q9BVJ7 150 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TRPV5Q9NQA5 729 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 TM7SF3Q9NS93 570 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 ACTR10Q9NZ32 417 aa10.21□□□□□ -0.78
CARMIL3-202ENST00000559694 NR2F6P10588 404 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 PVRP15151 417 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 IL7RP16871 459 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ITGA2P17301 1181 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 IST1P53990 364 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 MAZP56270 477 aaKnown RBP10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 RGS8P57771 180 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 SH3BP2P78314 561 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ZNF763Q0D2J5 394 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ABRAXAS2Q15018 415 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ZNF773Q6PK81 442 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 RNF44Q7L0R7 432 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 CNTN4Q8IWV2 1026 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ATP6V1C2Q8NEY4 427 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 RNFT2Q96EX2 444 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 SPRTNQ9H040 489 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 HTR3EA5X5Y0 456 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 PGRP06401 933 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 HOXD12P35452 270 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 CD97P48960 835 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 CDKL1Q00532 357 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 SLAMF1Q13291 335 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 SYT16Q17RD7 645 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 C5orf22Q49AR2 442 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 PYDC2Q56P42 97 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 MZT2BQ6NZ67 158 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 CADM2Q8N3J6 435 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ZNF480Q8WV37 535 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 OR1E3Q8WZA6 343 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 PRRG3Q9BZD7 231 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ACTR3BQ9P1U1 418 aa10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 ZNF282Q9UDV7 671 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-202ENST00000559694 PCTPQ9UKL6 214 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms