RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SPTBP11277 2137 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CCDC187A0A096LP49 1063 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 FAM149AA5PLN7 773 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 ANKDD1BA6NHY2 528 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 TMEM150CB9EJG8 249 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 NDUFS4O43181 175 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 BCAS2O75934 225 aaPredicted RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 KRT36O76013 467 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 STATHP02808 62 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 ASMTP46597 345 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MS4A2Q01362 244 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MC2RQ01718 297 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 HKDC1Q2TB90 917 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 PRTGQ2VWP7 1150 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 DEPDC1Q5TB30 811 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MSANTD1Q6ZTZ1 278 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 RAB11FIP2Q7L804 512 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 COMMD6Q7Z4G1 85 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 DHDDSQ86SQ9 333 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 GALNT15Q8N3T1 639 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CSNK1A1LQ8N752 337 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 RNF148Q8N7C7 305 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 NT5CQ8TCD5 201 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MACROD1Q9BQ69 325 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 AICDAQ9GZX7 198 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 SPRTNQ9H040 489 aaPredicted RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 FANCEQ9HB96 536 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 FBXO8Q9NRD0 319 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 AKAP7Q9P0M2 348 aaPredicted RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 MAPRE3Q9UPY8 281 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MAN2B2Q9Y2E5 1009 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 NEUROG3Q9Y4Z2 214 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 KNTC1P50748 2209 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 C15orf38-AP3S2A0A0A6YYH1 394 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 FITM1A5D6W6 292 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 SH3BGRLO75368 114 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 KLHL18O94889 574 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 EIF2S1P05198 315 aaKnown RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 ANXA4P09525 319 aaPredicted RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 HSD17B1P14061 328 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 S100A3P33764 101 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 HNRNPFP52597 415 aaKnown RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 TRAP1Q12931 704 aaKnown RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 EIF3IQ13347 325 aaKnown RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 TRIM25Q14258 630 aaKnown RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 MAPKAPK3Q16644 382 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 UGT8Q16880 541 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 DPY19L1Q2PZI1 675 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 TCTE1Q5JU00 501 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 AAGABQ6PD74 315 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 ARPINQ7Z6K5 226 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 MARCH9Q86YJ5 346 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 ARHGEF39Q8N4T4 335 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 CAMKVQ8NCB2 501 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 DNAJB8Q8NHS0 232 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 STARD8Q92502 1023 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 N4BP2L2Q92802 583 aaPredicted RBP15.69■□□□□ 0.1
TPM1-219ENST00000559397 STMN2Q93045 179 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 ASB9Q96DX5 294 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 OR52E6Q96RD3 313 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 SLC6A16Q9GZN6 736 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 APMAPQ9HDC9 416 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 STARD5Q9NSY2 213 aa15.69■□□□□ 0.1
TPM1-219ENST00000559397 PMS2P1A4D2B8 440 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 LRIT2A6NDA9 550 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 PCDH7O60245 1069 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 FKBP6O75344 327 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 SLC35G6P0C7Q6 338 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 FGF5P12034 268 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 ITIH1P19827 911 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 MSX2P35548 267 aaPredicted RBP15.68■□□□□ 0.1
TPM1-219ENST00000559397 ETV5P41161 510 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 ITGA1P56199 1179 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 SRSF11Q05519 484 aaKnown RBP15.68■□□□□ 0.1
TPM1-219ENST00000559397 IL11RAQ14626 422 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 MANEAQ5SRI9 462 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 KHDRBS2Q5VWX1 349 aaKnown RBP15.68■□□□□ 0.1
TPM1-219ENST00000559397 NANOGP8Q6NSW7 305 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 DGLUCYQ7Z3D6 616 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 CAMKMTQ7Z624 323 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 BPHLQ86WA6 291 aaPredicted RBP15.68■□□□□ 0.1
TPM1-219ENST00000559397 CGREF1Q99674 301 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 NANOGQ9H9S0 305 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 SERHLQ9NQF3 203 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 BCAP29Q9UHQ4 241 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 MCM8Q9UJA3 840 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 SERTAD3Q9UJW9 196 aa15.68■□□□□ 0.1
TPM1-219ENST00000559397 TRBV5-3A0A0A0MS03 114 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 OR2B3O76000 313 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 LRATO95237 230 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 KCNH1O95259 989 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SERPIND1P05546 499 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 GCGRP47871 477 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 EEFSECP57772 596 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 SNRPNP63162 240 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 RCN1Q15293 331 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ADPRMQ3LIE5 342 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 KCT2Q8NC54 265 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 FAM156AQ8NDB6 213 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms