RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PRTFDC1Q9NRG1 225 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 PNO1Q9NRX1 252 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 PSD3Q9NYI0 1048 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 GRID1Q9ULK0 1009 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 DAPP1Q9UN19 280 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 SNX6Q9UNH7 406 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 STK38LQ9Y2H1 464 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 TSC22D4Q9Y3Q8 395 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ASB1Q9Y576 335 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 COPG1Q9Y678 874 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 CLCA3PQ9Y6N3 262 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CFAP46Q8IYW2 2715 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 PCM1Q15154 2024 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HELZ2Q9BYK8 2649 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 SNRNP200O75643 2136 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 IGKV3D-11A0A0A0MRZ8 115 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 A0A0G2JN53 185 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TCRBV16S1A1N1A0A5B0 115 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OR5H15A6NDH6 313 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SAGE2PA6NJ88 616 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SMIM23A6NLE4 172 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 FAM227AF5H4B4 570 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 H3BQF6 201 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 GOLGA8RI6L899 631 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SAP18O00422 153 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 CYR61O00622 381 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 COPEO14579 308 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OR7A17O14581 309 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PRAMEF4O60810 478 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CTNSO60931 367 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 GLRA3O75311 464 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 GUCY1B2O75343 617 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SH3BGRLO75368 114 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ULK1O75385 1050 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CRCPO75575 148 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MYO1DO94832 1006 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SEMA3DO95025 777 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RASAL1O95294 804 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 B3GALT4O96024 378 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CRYABP02511 175 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 KRT6AP02538 564 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 KRT6BP04259 564 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MYL2P10916 166 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ITGAMP11215 1152 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CD46P15529 392 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 KRT4P19013 534 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 EPORP19235 508 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 IMPDH1P20839 514 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ATP5A1P25705 553 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 CERS1P27544 350 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 KRT6CP48668 564 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CYB561P49447 251 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TNFSF10P50591 281 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 NEK2P51955 445 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SLC26A5P58743 744 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RPS13P62277 151 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 SNRPNP63162 240 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 BTG2P78543 158 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OC90Q02509 493 aaPredicted RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 CLCQ05315 142 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 Q0VFX4 171 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SLAMF1Q13291 335 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RUNX2Q13950 521 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RASA2Q15283 850 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ZRSR2Q15696 482 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 ELAVL1Q15717 326 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 IGFBP7Q16270 282 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 INAQ16352 499 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PLEKHN1Q494U1 663 aaPredicted RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 GGTA1PQ4G0N0 100 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 COLEC12Q5KU26 742 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ACER2Q5QJU3 275 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 UBAP2Q5T6F2 1119 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 PRAMEF9Q5VWM5 478 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ADNP2Q6IQ32 1131 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 WDR93Q6P2C0 686 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 EMBQ6PCB8 327 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 FAM180AQ6UWF9 173 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 VN1R5Q7Z5H4 357 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CLNKQ7Z7G1 428 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 GPR180Q86V85 440 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 NUDT13Q86X67 352 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TDRPQ86YL5 185 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TMEM151BQ8IW70 566 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 GSPT2Q8IYD1 628 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 LGI4Q8N135 537 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TMEM132CQ8N3T6 1108 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ZCCHC7Q8N3Z6 543 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 RIBC1Q8N443 379 aaPredicted RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 CISD2Q8N5K1 135 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 BCORP1Q8N888 145 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 L3MBTL4Q8NA19 623 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CCDC63Q8NA47 563 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 FAM98AQ8NCA5 519 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 GALNT11Q8NCW6 608 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 LRRN4CLQ8ND94 238 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 B3GNT7Q8NFL0 401 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MYRIPQ8NFW9 859 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OR52B6Q8NGF0 335 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OR5L2Q8NGL0 311 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms