RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SNX15Q9NRS6 342 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 DNAJC11Q9NVH1 559 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 HCN3Q9P1Z3 774 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZFP69BQ9UJL9 534 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 PTBP2Q9UKA9 531 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 RNF112Q9ULX5 631 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NFU1Q9UMS0 254 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 GPR55Q9Y2T6 319 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC22A7Q9Y694 548 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 SPTAN1Q13813 2472 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR2W5A6NFC9 320 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 UBXN8O00124 270 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 MAP2K7O14733 419 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 GALR3O60755 368 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 KERAO60938 352 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 DNAJB6O75190 326 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 STK16O75716 305 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 SERPIND1P05546 499 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF888P0CJ79 500 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 C1GALT1C1LP0DN25 315 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 COX6A1P12074 109 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 MTHFD2P13995 350 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 GNAZP19086 355 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD22P20273 847 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 XCR1P46094 333 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD97P48960 835 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 SERPINB8P50452 374 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 EMP2P54851 167 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 EEF1A2Q05639 463 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 PCOLCEQ15113 449 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 RBBP5Q15291 538 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NADK2Q4G0N4 442 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 DEFB134Q4QY38 66 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 FAAH2Q6GMR7 532 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 TMEM205Q6UW68 189 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 TCAIMQ8N3R3 496 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 RBMXL3Q8N7X1 1067 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 Q8NA96 180 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR5T3Q8NGG3 340 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR51Q1Q8NH59 317 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 UHMK1Q8TAS1 419 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 UTP15Q8TED0 518 aaKnown RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 CREB3L4Q8TEY5 395 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NINJ1Q92982 152 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 GPR78Q96P69 363 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 VN1R1Q9GZP7 353 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NMRAL1Q9HBL8 299 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZBTB20Q9HC78 741 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF160Q9HCG1 818 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 GPRC5BQ9NZH0 403 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NUDT4Q9NZJ9 180 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD274Q9NZQ7 290 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 COPG2Q9UBF2 871 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 STOML1Q9UBI4 398 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 ACOT9Q9Y305 439 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 NAALAD2Q9Y3Q0 740 aa5.68□□□□□ -1.5
CTDSPL2-204ENST00000558966 A0A087X1B8 175 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 LOC102723996A0A087X1L8 192 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 A0A096LPK6 155 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 IGHV1-45A0A0A0MS14 117 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 SUPT3HB4E1H0 165 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 DLX3O60479 287 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCNT2O60583 730 aaKnown RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 SUPT3HO75486 399 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 SORBS2O94875 1100 aaKnown RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 KLHL2O95198 593 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 TBX6O95947 436 aaPredicted RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 HPP00738 406 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 S100BP04271 92 aaPredicted RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 HEXBP07686 556 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 SERPINA6P08185 405 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 RHOXF2BP0C7M4 288 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 SMIM10L1P0DMW3 83 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 ALOX12P18054 663 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 ITGA3P26006 1051 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 MAGEA12P43365 314 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 GLRBP48167 497 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 AGTR2P50052 363 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 RAB8AP61006 207 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 OLR1P78380 273 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 RGS1Q08116 209 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 DOC2AQ14183 400 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 E2F2Q14209 437 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 HERC3Q15034 1050 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 PDK4Q16654 411 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRSS53Q2L4Q9 553 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 FAM153CQ494X1 144 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 ADNP2Q6IQ32 1131 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 JMJD6Q6NYC1 403 aaPredicted RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 LANCL3Q6ZV70 420 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 LRRC70Q7Z2Q7 622 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCDC91Q7Z6B0 441 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 PLD6Q8N2A8 252 aaKnown RBP5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 TBC1D19Q8N5T2 526 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRPV3Q8NET8 790 aa5.67□□□□□ -1.5
CTDSPL2-204ENST00000558966 RHEBL1Q8TAI7 183 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms