RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KCNK16Q96T55 309 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 PAPOLGQ9BWT3 736 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 XPO4Q9C0E2 1151 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 ABCG4Q9H172 646 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 WDR13Q9H1Z4 485 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 MED20Q9H944 212 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 C3orf14Q9HBI5 128 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 KCNMB3Q9NPA1 279 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 UBE2TQ9NPD8 197 aaPredicted RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 ATAD3AQ9NVI7 634 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 KLHL8Q9P2G9 620 aaPredicted RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 ERRFI1Q9UJM3 462 aaPredicted RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 PPP1R3CQ9UQK1 317 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 ZHX2Q9Y6X8 837 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 MACROD2A1Z1Q3 448 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 MEIOCA2RUB1 952 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CFAP73A6NFT4 308 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 TLR4O00206 839 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ARPC1BO15143 372 aaKnown RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 B3GALNT1O75752 331 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 STAM2O75886 525 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 STBD1O95210 358 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CXCL10P02778 98 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 PGK2P07205 417 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CD48P09326 243 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 FCARP24071 287 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ACP1P24666 158 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 GPR183P32249 361 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 SOX3P41225 446 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 GEMP55040 296 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 XGP55808 180 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 SRP54P61011 504 aaKnown RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 ABCE1P61221 599 aaKnown RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 CSNK2BP67870 215 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 MFGE8Q08431 387 aaPredicted RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 GK2Q14410 553 aaPredicted RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 INAQ16352 499 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 MPPE1Q53F39 396 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 SPANXN4Q5MJ08 99 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 NKAIN2Q5VXU1 208 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 HIST2H2AA3Q6FI13 130 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 TMEM64Q6YI46 380 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CDHR3Q6ZTQ4 885 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ZC3H3Q8IXZ2 948 aaKnown RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 COLGALT1Q8NBJ5 622 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CCNYQ8ND76 341 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CNNM3Q8NE01 707 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 TMEM185AQ8NFB2 350 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 OR5M9Q8NGP3 310 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 OR4A16Q8NH70 328 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 HCAR2Q8TDS4 363 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 DNASE2BQ8WZ79 361 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 C14orf79Q96F83 325 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ZNF274Q96GC6 653 aaPredicted RBP3.83□□□□□ -1.8
CASC4-206ENST00000558847 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 USP28Q96RU2 1077 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 ASCL2Q99929 193 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CLEC7AQ9BXN2 247 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 FTHL17Q9BXU8 183 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 CARD9Q9H257 536 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 DCLRE1BQ9H816 532 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 HPF1Q9NWY4 346 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 VPS54Q9P1Q0 977 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 EPS15L1Q9UBC2 864 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 NARFQ9UHQ1 456 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 PSORS1C1Q9UIG5 152 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 PILRAQ9UKJ1 303 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 DNPEPQ9ULA0 475 aa3.83□□□□□ -1.8
CASC4-206ENST00000558847 DISP3Q9P2K9 1392 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 ZNF195O14628 629 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 GAS8-AS1O95177 125 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 CXCL14O95715 111 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 CPNE6O95741 557 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 MT-ATP6P00846 226 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 IGKV3-20P01619 116 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 IGHEP01854 428 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 CHRNGP07510 517 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 NUDT17P0C025 328 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 GMFBP60983 142 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 ERVK-16P61578 105 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 GNB1P62873 340 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 GCKRQ14397 625 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 HERC4Q5GLZ8 1057 aaPredicted RBP3.82□□□□□ -1.8
CASC4-206ENST00000558847 PWWP2BQ6NUJ5 590 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 Q6ZVQ6 151 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 C5orf24Q7Z6I8 188 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 DND1Q8IYX4 353 aaKnown RBP3.82□□□□□ -1.8
CASC4-206ENST00000558847 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 TAF4BQ92750 862 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 ZNF501Q96CX3 271 aaPredicted RBP3.82□□□□□ -1.8
CASC4-206ENST00000558847 RPGRIP1Q96KN7 1286 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 PGLYRP2Q96PD5 576 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 BARHL1Q9BZE3 327 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 KRT23Q9C075 422 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms