RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 C1orf21Q9H246 121 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 WDR41Q9HAD4 459 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 EFCAB1Q9HAE3 211 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 SLC52A3Q9NQ40 469 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 STARD5Q9NSY2 213 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 NDE1Q9NXR1 346 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 KCMF1Q9P0J7 381 aa14.09□□□□□ -0.15
VPS18-202ENST00000558474 LEF1Q9UJU2 399 aaPredicted RBP14.09□□□□□ -0.15
VPS18-202ENST00000558474 A0A0G2JN53 185 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 EFCAB7A8K855 629 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 SLC30A4O14863 429 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 ANGPT2O15123 496 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 POLR1CO15160 346 aaPredicted RBP14.08□□□□□ -0.16
VPS18-202ENST00000558474 PGRP06401 933 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 CTSBP07858 339 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 T-ENOLP0DO92 83 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 COX7A2P14406 83 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 IL1RNP18510 177 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 SDHBP21912 280 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 S100A3P33764 101 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 KIR3DL1P43629 444 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 LIM2P55344 173 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 HNRNPH2P55795 449 aaKnown RBP14.08□□□□□ -0.16
VPS18-202ENST00000558474 RAB38P57729 211 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 TNFRSF17Q02223 184 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 FOXM1Q08050 763 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 UGT8Q16880 541 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 CPTPQ5TA50 214 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 ANXA8L1Q5VT79 327 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 GK5Q6ZS86 529 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 SNX32Q86XE0 403 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 SAMD14Q8IZD0 417 aaPredicted RBP14.08□□□□□ -0.16
VPS18-202ENST00000558474 KRTCAP2Q8N6L1 136 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 AMER3Q8N944 861 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 CLHC1Q8NHS4 586 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 RMND5AQ9H871 391 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 MIEF1Q9NQG6 463 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 FAM120CQ9NX05 1096 aaKnown RBP14.08□□□□□ -0.16
VPS18-202ENST00000558474 PSME2Q9UL46 239 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 CLCA2Q9UQC9 943 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 MRPS2Q9Y399 296 aaKnown RBP14.08□□□□□ -0.16
VPS18-202ENST00000558474 PCDHA9Q9Y5H5 950 aa14.08□□□□□ -0.16
VPS18-202ENST00000558474 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 A0A1B0GX78 115 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 GABRR3A8MPY1 467 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 NR5A2O00482 541 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 ZNF749O43361 778 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 KRT34O76011 436 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 CBX6O95503 412 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 ONECUT2O95948 504 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 NR2F6P10588 404 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 CPN2P22792 545 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 RUNX2Q13950 521 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 FAM174BQ3ZCQ3 159 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 SPANXN4Q5MJ08 99 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 CEACAM20Q6UY09 585 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 HACD2Q6Y1H2 254 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 DGLUCYQ7Z3D6 616 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 SLCO6A1Q86UG4 719 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 CA13Q8N1Q1 262 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 DPP10Q8N608 796 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 CDC26Q8NHZ8 85 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 ROPN1LQ96C74 230 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 PPCDCQ96CD2 204 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 LRFN5Q96NI6 719 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 MAPKAP1Q9BPZ7 522 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 DUSP26Q9BV47 211 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 B3GNT4Q9C0J1 378 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 OCIAD1Q9NX40 245 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 FBXW2Q9UKT8 454 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 EXO1Q9UQ84 846 aaKnown RBP14.07□□□□□ -0.16
VPS18-202ENST00000558474 MRPS33Q9Y291 106 aaKnown RBP14.07□□□□□ -0.16
VPS18-202ENST00000558474 ATG4BQ9Y4P1 393 aa14.07□□□□□ -0.16
VPS18-202ENST00000558474 PCNX2A6NKB5 2137 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 CCDC187A0A096LP49 1063 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 A0A0A6YYC8 382 aaPredicted RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 A0A1W2PR48 441 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 SYNDIG1LA6NDD5 238 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 I3L1I5 382 aaPredicted RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 SGK494L7N484 410 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 RNASET2O00584 256 aaKnown RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 AKAP10O43572 662 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 GFRA3O60609 400 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 CSO75390 466 aaKnown RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 SCRG1O75711 98 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 LRATO95237 230 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 KRT16P08779 473 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 FTH1P19P0C7X4 201 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 PIM1P11309 404 aaPredicted RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 RNH1P13489 461 aaKnown RBP14.06□□□□□ -0.16
VPS18-202ENST00000558474 CAPN3P20807 821 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 PPP2R1BP30154 601 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 BIKQ13323 160 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 DSG2Q14126 1118 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 TLR1Q15399 786 aa14.06□□□□□ -0.16
VPS18-202ENST00000558474 MAPKAPK3Q16644 382 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms