RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MFAP5Q13361 173 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 RAPSNQ13702 412 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 RUNX2Q13950 521 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 SERTAD2Q14140 314 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 TLR1Q15399 786 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 TERF2Q15554 542 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 ZRSR2Q15696 482 aaKnown RBP7.97□□□□□ -1.13
TPM1-213ENST00000558400 BTBD16Q32M84 506 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 GGTA1PQ4G0N0 100 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 SFT2D3Q587I9 215 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 ABHD17BQ5VST6 288 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 FRG2Q64ET8 278 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 TTC19Q6DKK2 380 aaPredicted RBP7.97□□□□□ -1.13
TPM1-213ENST00000558400 GSPT2Q8IYD1 628 aaKnown RBP7.97□□□□□ -1.13
TPM1-213ENST00000558400 RBMXL3Q8N7X1 1067 aaKnown RBP7.97□□□□□ -1.13
TPM1-213ENST00000558400 ACOT4Q8N9L9 421 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 DNAJB14Q8TBM8 379 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 RDH11Q8TC12 318 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 HAS2Q92819 552 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 CAVIN3Q969G5 261 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 ZNF354BQ96LW1 612 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 FRG2BQ96QU4 278 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 MTERF1Q99551 399 aaKnown RBP7.97□□□□□ -1.13
TPM1-213ENST00000558400 PARD6BQ9BYG5 372 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 AICDAQ9GZX7 198 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 MMP25Q9NPA2 562 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 PRTFDC1Q9NRG1 225 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 ABI3Q9P2A4 366 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 MID2Q9UJV3 735 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 SNX6Q9UNH7 406 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 RNF11Q9Y3C5 154 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
TPM1-213ENST00000558400 SCN3AQ9NY46 2000 aa7.96□□□□□ -1.13
TPM1-213ENST00000558400 A0A1W2PPM1 405 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 TCRBV16S1A1N1A0A5B0 115 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 TLDC2A0PJX2 215 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 LRRC14BA6NHZ5 514 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 A8MT66 165 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 FAM227AF5H4B4 570 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 GOLGA8RI6L899 631 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 CYR61O00622 381 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 COPEO14579 308 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 OR7A17O14581 309 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 DLX3O60479 287 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 DNAJB6O75190 326 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SEMA3DO95025 777 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 B3GALT4O96024 378 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 KRT6AP02538 564 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 KRT6BP04259 564 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SHBGP04278 402 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 RPS17P08708 135 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 SBK3P0C264 359 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 KRT4P19013 534 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PPP2R1BP30154 601 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SSR2P43308 183 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SLCO1A2P46721 670 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 KRT6CP48668 564 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 BTG2P78543 158 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 CLCQ05315 142 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SLC13A2Q13183 592 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 DDX39BQ13838 428 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 ERCC6LQ2NKX8 1250 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 NADK2Q4G0N4 442 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ZNF678Q5SXM1 525 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 B3GNTL1Q67FW5 361 aaPredicted RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 H3F3CQ6NXT2 135 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 Q6ZS92 163 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 LANCL3Q6ZV70 420 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SH2D5Q6ZV89 423 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PAGE2Q7Z2X7 111 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 UBE3DQ7Z6J8 389 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 CROCCP2Q86T23 111 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 GPR180Q86V85 440 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 IQCKQ8N0W5 287 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 CYP4X1Q8N118 509 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 TMEM132CQ8N3T6 1108 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ZCCHC7Q8N3Z6 543 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 SLC5A8Q8N695 610 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 OR52B6Q8NGF0 335 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 WDR20Q8TBZ3 569 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 TRPC4APQ8TEL6 797 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ZNF483Q8TF39 744 aaPredicted RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 AENQ8WTP8 325 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 MZB1Q8WU39 189 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PSMF1Q92530 271 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 TANKQ92844 425 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 L3HYPDHQ96EM0 354 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 WDR77Q9BQA1 342 aaPredicted RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 RNF32Q9H0A6 362 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ILKAPQ9H0C8 392 aaPredicted RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 OR51B5Q9H339 312 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ELOVL6Q9H5J4 265 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 DDX31Q9H8H2 851 aaKnown RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 BRF2Q9HAW0 419 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 KCNK13Q9HB14 408 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ZBTB26Q9HCK0 441 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 SEMA4BQ9NPR2 832 aaPredicted RBP7.96□□□□□ -1.14
TPM1-213ENST00000558400 DMRT3Q9NQL9 472 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 RYDENQ9NUL5 291 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms