RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FAM186AA6NE01 2351 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 RIF1Q5UIP0 2472 aaKnown RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 H3BMH7 237 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PLD2O14939 933 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ANGPT2O15123 496 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ZNF749O43361 778 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 NPPAP01160 153 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CYC1P08574 325 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 COX7A2P14406 83 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 DDCP20711 480 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ALAS2P22557 587 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CALB2P22676 271 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CPN2P22792 545 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PIK3R1P27986 724 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 S100A3P33764 101 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 RAB38P57729 211 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TAS2R50P59544 299 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 SNRPNP63162 240 aaKnown RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 RAE1P78406 368 aaKnown RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 ABHD18Q0P651 414 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 C16orf72Q14CZ0 275 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 MMEL1Q495T6 779 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CPTPQ5TA50 214 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 FAM71E1Q6IPT2 247 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TTLL10Q6ZVT0 673 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 MED25Q71SY5 747 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CAMKMTQ7Z624 323 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ARHGEF39Q8N4T4 335 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 FITM2Q8N6M3 262 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ADAMTS14Q8WXS8 1223 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TANKQ92844 425 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PMEPA1Q969W9 287 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 MMABQ96EY8 250 aaPredicted RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 NSL1Q96IY1 281 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 OR1F2PQ96R84 312 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 EBPLQ9BY08 206 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ZNF717Q9BY31 904 aaPredicted RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 BHLHE41Q9C0J9 482 aaPredicted RBP11.75□□□□□ -0.53
TPM1-209ENST00000558072 CLMPQ9H6B4 373 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ZNF304Q9HCX3 659 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TAS2R7Q9NYW3 318 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 GIMAP2Q9UG22 337 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 NDOR1Q9UHB4 597 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 TAGLN3Q9UI15 199 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PCDHGB4Q9UN71 923 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 DLGAP4Q9Y2H0 992 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 PCDHGA3Q9Y5H0 932 aa11.75□□□□□ -0.53
TPM1-209ENST00000558072 A0A1W2PNU3 283 aaPredicted RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 CAPN14A8MX76 684 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 RTCAO00442 366 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 SCAMP2O15127 329 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 PROM1O43490 865 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 EEDO75530 441 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 BMP10O95393 424 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ONECUT2O95948 504 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ATXN8OSP0DMR3 200 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 NR2F6P10588 404 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ESRRAP11474 423 aaPredicted RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 IL1RNP18510 177 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 SPINK2P20155 84 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 CERS1P27544 350 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 CD82P27701 267 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 KIR3DL1P43629 444 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 DCDP81605 110 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 DSG2Q14126 1118 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 RCAN2Q14206 197 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 OR52E8Q6IFG1 317 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 C6orf89Q6UWU4 347 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 YTHDF3Q7Z739 585 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 DSELQ8IZU8 1212 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 BMPERQ8N8U9 685 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 OR8J2Q8NGG1 315 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ZFP28Q8NHY6 868 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 CDC26Q8NHZ8 85 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.74□□□□□ -0.53
TPM1-209ENST00000558072 TM4SF18Q96CE8 201 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 COQ8BQ96D53 544 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 SPDL1Q96EA4 605 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 C10orf90Q96M02 699 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 MACROD1Q9BQ69 325 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 PELOQ9BRX2 385 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 EFCAB1Q9HAE3 211 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 MKKSQ9NPJ1 570 aaPredicted RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 LHX9Q9NQ69 397 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 C14orf105Q9NVL8 296 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 GID8Q9NWU2 228 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 FAM120CQ9NX05 1096 aaKnown RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 CCDC167Q9P0B6 97 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
TPM1-209ENST00000558072 MAP4K5Q9Y4K4 846 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ASB4Q9Y574 426 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms