RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TM4SF18Q96CE8 201 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CCDC115Q96NT0 180 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TEFMQ96QE5 360 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 OR2A14Q96R47 310 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PKP2Q99959 881 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 KCTD14Q9BQ13 255 aaPredicted RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 DUSP26Q9BV47 211 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TRIM4Q9C037 500 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PCED1AQ9H1Q7 454 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 SRMSQ9H3Y6 488 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 KAT8Q9H7Z6 458 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 RMND5AQ9H871 391 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TM9SF3Q9HD45 589 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 MYNNQ9NPC7 610 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 FAM120CQ9NX05 1096 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 ACTR10Q9NZ32 417 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 DLGAP2Q9P1A6 1054 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 APOBEC3BQ9UH17 382 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 BTNL2Q9UIR0 455 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 RIMS3Q9UJD0 308 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 C15orf41Q9Y2V0 281 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 SIT1Q9Y3P8 196 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 LRRC42Q9Y546 428 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 SNX13Q9Y5W8 968 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 A0A0A6YYD5 115 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 KIR2DS5A0A0G2JLQ3 304 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 A0A0G2JN53 185 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 A0A0G2JNG1 304 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ARHGAP10A1A4S6 786 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 OR2A25A4D2G3 310 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 AQP12BA6NM10 295 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 OR5K4A6NMS3 321 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 KIR2DS3K7RE56 304 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 RFXANKO14593 260 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CASQ2O14958 399 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 NDUFS4O43181 175 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 TNFSF14O43557 240 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 PRAMEF10O60809 474 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CPNE3O75131 537 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 CCNDBP1O95273 360 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CPSF4O95639 269 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 DLGAP3O95886 979 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CAPNS1P04632 268 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 IL3P08700 152 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CTSEP14091 401 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 NME1P15531 152 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 UGT2B7P16662 529 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 GGT1P19440 569 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 PEX2P28328 305 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 SLC7A1P30825 629 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 MAZP56270 477 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 PPP1CAP62136 330 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 RACK1P63244 317 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 KIR2DS3Q14952 304 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 KIR2DS5Q14953 304 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ADPRMQ3LIE5 342 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CCNYL2Q5T2Q4 361 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ANXA8L1Q5VT79 327 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 IRAK1BP1Q5VVH5 260 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 LPCAT4Q643R3 524 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 FCRL6Q6DN72 434 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ZNF793Q6ZN11 406 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 DGLUCYQ7Z3D6 616 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 VN1R4Q7Z5H5 301 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 IQCHQ86VS3 1027 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ZNF761Q86XN6 746 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 TRIM48Q8IWZ4 208 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 AQP12AQ8IXF9 295 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 TMEFF1Q8IYR6 380 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CLEC4FQ8N1N0 589 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 TMEM132CQ8N3T6 1108 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 FAM47BQ8NA70 645 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ZNF548Q8NEK5 533 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 FAM46DQ8NEK8 389 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 TTLQ8NG68 377 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 DNAJB8Q8NHS0 232 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ZFPM2Q8WW38 1151 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 DNASE2BQ8WZ79 361 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 CIDECQ96AQ7 238 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 MS4A6EQ96DS6 147 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 RSRC1Q96IZ7 334 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 HSPA12BQ96MM6 686 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 FCRL4Q96PJ5 515 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 ECSITQ9BQ95 431 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 THUMPD3Q9BV44 507 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 ABCG4Q9H172 646 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 MUC13Q9H3R2 512 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 RPF2Q9H7B2 306 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 DDX31Q9H8H2 851 aaKnown RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 COPS7BQ9H9Q2 264 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 CCM2LQ9NUG4 571 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 POT1Q9NUX5 634 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 AHSPQ9NZD4 102 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 C6orf203Q9P0P8 240 aaPredicted RBP7.01□□□□□ -1.29
SPG11-204ENST00000557866 SH3BP4Q9P0V3 963 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 THEGQ9P2T0 379 aa7.01□□□□□ -1.29
SPG11-204ENST00000557866 BCAP29Q9UHQ4 241 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms