RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CDC42EP5Q6NZY7 148 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 GTF2H2CQ6P1K8 395 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SLC27A4Q6P1M0 643 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SLC39A4Q6P5W5 647 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ZNF66Q6ZN08 573 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 COX8CQ7Z4L0 72 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CBWD2Q8IUF1 395 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 UBE2J2Q8N2K1 259 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CLIP4Q8N3C7 705 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 LRTM2Q8N967 370 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 MLKLQ8NB16 471 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 OR52K1Q8NGK4 314 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 OR8J1Q8NGP2 316 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 OR1J1Q8NGS3 322 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 OR4L1Q8NH43 312 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 OR52N5Q8NH56 324 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 MIPOL1Q8TD10 442 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ANKRD49Q8WVL7 239 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TANKQ92844 425 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 NSL1Q96IY1 281 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 FCRL4Q96PJ5 515 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 GSDMAQ96QA5 445 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 USP28Q96RU2 1077 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CDCA3Q99618 268 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 AGPAT1Q99943 283 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SLC39A3Q9BRY0 314 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 GSDMCQ9BYG8 508 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SLC26A1Q9H2B4 701 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PNNQ9H307 717 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 R3HDMLQ9H3Y0 253 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 FAM124BQ9H5Z6 455 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 RPAP3Q9H6T3 665 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 METTL7AQ9H8H3 244 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TMEM30AQ9NV96 361 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TUBA8Q9NY65 449 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 HOXC10Q9NYD6 342 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 EPHA6Q9UF33 1036 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SIX4Q9UIU6 781 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PILRAQ9UKJ1 303 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PACSIN3Q9UKS6 424 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 AP4B1Q9Y6B7 739 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ZNF804BA4D1E1 1349 aa3.46□□□□□ -1.85
TDP1-217ENST00000557782 ZMYM6O95789 1325 aa3.46□□□□□ -1.85
TDP1-217ENST00000557782 A0A075B6Q4 140 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 YJEFN3A6XGL0 299 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 C4orf47A7E2U8 309 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LACTBL1A8MY62 500 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 E5RJQ4 531 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ADAM10O14672 748 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 RGS14O43566 566 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 SLC28A2O43868 658 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 KIF5CO60282 957 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 BCAS1O75363 584 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 UFL1O94874 794 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 NDUFA7O95182 113 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CLDN14O95500 239 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 PRKCGP05129 697 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 FGF4P08620 206 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ANXA4P09525 319 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 DBTP11182 482 aaKnown RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 GP1BBP13224 206 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ANXA8P13928 327 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ZNF44P15621 663 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LHCGRP22888 699 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 MPGP29372 298 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ALDH1B1P30837 517 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 HOXD3P31249 432 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 RFX5P48382 616 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 PPT1P50897 306 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CNTN2Q02246 1040 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 SP3Q02447 781 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ZNF155Q12901 538 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 ZBTB17Q13105 803 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 GPS2Q13227 327 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 NFATC2Q13469 925 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 GPR50Q13585 617 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 EFTUD2Q15029 972 aaKnown RBP eCLIP3.46□□□□□ -1.86
TDP1-217ENST00000557782 WDR43Q15061 677 aaKnown RBP eCLIP3.46□□□□□ -1.86
TDP1-217ENST00000557782 TAF13Q15543 124 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 C1orf185Q5T7R7 199 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ARMC12Q5T9G4 340 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ATF7IP2Q5U623 682 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ANXA8L1Q5VT79 327 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LIPJQ5W064 366 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 DHRS11Q6UWP2 260 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CEACAM20Q6UY09 585 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 TMEM64Q6YI46 380 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ASB18Q6ZVZ8 466 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 PTF1AQ7RTS3 328 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 GOLGA7Q7Z5G4 137 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 FAM228AQ86W67 206 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ADHFE1Q8IWW8 467 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 PHC2Q8IXK0 858 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 EID3Q8N140 333 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LRRC43Q8N309 656 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ARL14Q8N4G2 192 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 DCLK2Q8N568 766 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LMNTD1Q8N9Z9 388 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms