RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 WDR34Q96EX3 536 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PTCD3Q96EY7 689 aaKnown RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 DMRTA2Q96SC8 542 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 CPNE1Q99829 537 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 ERP44Q9BS26 406 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 SAYSD1Q9NPB0 183 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 ADAP2Q9NPF8 381 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 TIMMDC1Q9NPL8 285 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PRDM7Q9NQW5 492 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 CD274Q9NZQ7 290 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PTBP2Q9UKA9 531 aaKnown RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 DAPP1Q9UN19 280 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 NCOA6Q14686 2063 aaPredicted RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 A0A1B0GTH9 108 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 C19orf84I3L1E1 186 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 ADAM10O14672 748 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 PHGDHO43175 533 aaKnown RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 HS6ST1O60243 411 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 IFNA16P05015 189 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 TFEBP19484 476 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 PTGS2P35354 604 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 CALCOCO2Q13137 446 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 BMPR2Q13873 1038 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 OR4D1Q15615 310 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 ELAVL1Q15717 326 aaKnown RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 PDK4Q16654 411 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 HIST2H2ACQ16777 129 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 HIST2H2AA3Q6FI13 130 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 C3P1Q6ZMU1 363 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 C3orf62Q6ZUJ4 267 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 NCCRP1Q6ZVX7 275 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 ZFP62Q8NB50 900 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 SRFBP1Q8NEF9 429 aaKnown RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 FAM57AQ8TBR7 257 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 UBXN10Q96LJ8 280 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 F2RL3Q96RI0 385 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 GPR22Q99680 433 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 RBBP8Q99708 897 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 EFCAB11Q9BUY7 163 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 ALOXE3Q9BYJ1 711 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 COPS7BQ9H9Q2 264 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-213ENST00000557262 WHRNQ9P202 907 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 VTI1BQ9UEU0 232 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 CLCA3PQ9Y6N3 262 aa14.79□□□□□ -0.04
TUBB3-213ENST00000557262 DCHS2Q6V1P9 2916 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 OTOGQ6ZRI0 2925 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 FAM187AA6NFU0 413 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 PRKNO60260 465 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-213ENST00000557262 CERS1P27544 350 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 GP5P40197 560 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 RFC3P40938 356 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 KIR3DL1P43629 444 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 MRPS25P82663 173 aaKnown RBP14.78□□□□□ -0.04
TUBB3-213ENST00000557262 STX4Q12846 297 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 CHIT1Q13231 466 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 TBCCQ15814 346 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 CMPK2Q5EBM0 449 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 PAGE2BQ5JRK9 111 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 ADNP2Q6IQ32 1131 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 MAATS1Q7Z4T9 603 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 CLNKQ7Z7G1 428 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 GPALPP1Q8IXQ4 340 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 ZNF295-AS1Q8N0V1 137 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 MORN4Q8NDC4 146 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 DAZLQ92904 295 aaKnown RBP14.78□□□□□ -0.04
TUBB3-213ENST00000557262 KIAA1191Q96A73 305 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 LURAP1Q96LR2 239 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 ROGDIQ9GZN7 287 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 DPH5Q9H2P9 285 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 LIN28AQ9H9Z2 209 aaKnown RBP14.78□□□□□ -0.04
TUBB3-213ENST00000557262 KCMF1Q9P0J7 381 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 MYOTQ9UBF9 498 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 PPT2Q9UMR5 302 aa14.78□□□□□ -0.04
TUBB3-213ENST00000557262 TCRBV9S1A1TA0A576 114 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 FAM159BA6NKW6 160 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 A8MVJ9 347 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 CDC40O60508 579 aaKnown RBP eCLIP14.77□□□□□ -0.05
TUBB3-213ENST00000557262 CCNT2O60583 730 aaKnown RBP14.77□□□□□ -0.05
TUBB3-213ENST00000557262 OR2J2O76002 312 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 S100BP04271 92 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-213ENST00000557262 TUBB4AP04350 444 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 TPOP07202 933 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 GSTA2P09210 222 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 TNNI3P19429 210 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 CD22P20273 847 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-213ENST00000557262 CASP2P42575 452 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 KCNC1P48547 511 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 GPR85P60893 370 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 RAB10P61026 200 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 IRF8Q02556 426 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 ZKSCAN8Q15776 578 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-213ENST00000557262 GRTP1Q5TC63 336 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 TMEM211Q6ICI0 200 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 HSDL2Q6YN16 418 aa14.77□□□□□ -0.05
TUBB3-213ENST00000557262 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms