RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PIWIL2Q8TC59 973 aaKnown RBP11.99□□□□□ -0.49
PSEN1-219ENST00000556951 STT3BQ8TCJ2 826 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 MCOLN3Q8TDD5 553 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-219ENST00000556951 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 MENTQ9BUN1 341 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 NPHS2Q9NP85 383 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 PNPOQ9NVS9 261 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 IRAK4Q9NWZ3 460 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 NXT1Q9UKK6 140 aaKnown RBP11.99□□□□□ -0.49
PSEN1-219ENST00000556951 MAU2Q9Y6X3 613 aa11.99□□□□□ -0.49
PSEN1-219ENST00000556951 FITM1A5D6W6 292 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PABPN1LA6NDY0 278 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 SLCO1B7G3V0H7 640 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 EBAG9O00559 213 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 BMP10O95393 424 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 SERPINA7P05543 415 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 HIST1H2AGP0C0S8 130 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 ACPPP15309 386 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 HIST1H2ADP20671 130 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 EEF1DP29692 281 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 ARRB2P32121 409 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 RPL14P50914 215 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 SMSP52788 366 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 KIR2DS3Q14952 304 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PCBP2Q15366 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PHKG1Q16816 387 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 METTL2BQ6P1Q9 378 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 CLEC9AQ6UXN8 241 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 NDUFAF7Q7L592 441 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 WDR75Q8IWA0 830 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 TCAIMQ8N3R3 496 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 METTL27Q8N6F8 245 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 LINC01555Q8NAE3 123 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 RFWD2Q8NHY2 731 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 THOC1Q96FV9 657 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 FAR2Q96K12 515 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 HIST1H2AHQ96KK5 128 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 HIST1H2AJQ99878 128 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 H2AFJQ9BTM1 129 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 RNF32Q9H0A6 362 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 GSTO2Q9H4Y5 243 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 VTI1BQ9UEU0 232 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 POLG2Q9UHN1 485 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PTBP2Q9UKA9 531 aaKnown RBP11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PDE10AQ9Y233 779 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 ASF1AQ9Y294 204 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 PKD1L1Q8TDX9 2849 aa11.98□□□□□ -0.49
PSEN1-219ENST00000556951 IGLV3-12A0A075B6K2 115 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 NCF1BA6NI72 391 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 NCF1CA8MVU1 366 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ADAM10O14672 748 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 PSIP1O75475 530 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 SIX3O95343 332 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 CATP04040 527 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 HEXAP06865 529 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 CHRNGP07510 517 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 RPS17P08708 135 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ANXA5P08758 320 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ZGLP1P0C6A0 271 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ITGAMP11215 1152 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 NCF1P14598 390 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ARFIP2P53365 341 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 AP1S2P56377 157 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 YBX1P67809 324 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 SF3A3Q12874 501 aaKnown RBP eCLIP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 GRB7Q14451 532 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ZSCAN26Q16670 478 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 YOD1Q5VVQ6 348 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 FIGLAQ6QHK4 219 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ZNF771Q7L3S4 317 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 SPPL2CQ8IUH8 684 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 CHERPQ8IWX8 916 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 PHC2Q8IXK0 858 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 PRSS58Q8IYP2 241 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ZNF781Q8N8C0 355 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 OR5K2Q8NHB8 316 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ZNF483Q8TF39 744 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 UBTD2Q8WUN7 234 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 C10orf82Q8WW14 230 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 EGFL8Q99944 293 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 KCNK13Q9HB14 408 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 ARL15Q9NXU5 204 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 UTP6Q9NYH9 597 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 STOX2Q9P2F5 926 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 DCTN4Q9UJW0 460 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 C3orf18Q9UK00 162 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 TDRKHQ9Y2W6 561 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 MEMO1Q9Y316 297 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 MRPS2Q9Y399 296 aaKnown RBP11.97□□□□□ -0.49
PSEN1-219ENST00000556951 USH1CQ9Y6N9 552 aa11.97□□□□□ -0.49
PSEN1-219ENST00000556951 CPAMD8Q8IZJ3 1885 aa11.96□□□□□ -0.49
PSEN1-219ENST00000556951 IGHV1-45A0A0A0MS14 117 aa11.96□□□□□ -0.49
PSEN1-219ENST00000556951 NSG1A0A0A6YYJ2 146 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms