RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 CLDN16Q9Y5I7 305 aa8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-227ENST00000556897 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 A0A0G2JN53 185 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 MAGEB16A2A368 324 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 URADA6NGE7 173 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 GOLGA8MH3BSY2 632 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 SYT5O00445 386 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 SUSD5O60279 629 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 GUCA1CO95843 209 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 FGGP02679 453 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CNR1P21554 472 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 MAGEA6P43360 314 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 DNASE1L1P49184 302 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 ZNF75DP51815 510 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 HNRNPFP52597 415 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CDKN2DP55273 166 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 BTN3A2P78410 334 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 REEP5Q00765 189 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 FOXO1Q12778 655 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 GPS1Q13098 491 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 BMPR2Q13873 1038 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 RUNX2Q13950 521 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 HSP90AA5PQ58FG0 334 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TOR1AIP1Q5JTV8 583 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 UGT3A1Q6NUS8 523 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 PAMR1Q6UXH9 720 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 RTL4Q6ZR62 310 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CAMKMTQ7Z624 323 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CLNKQ7Z7G1 428 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TMEM139Q8IV31 216 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 LMNTD2Q8IXW0 634 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 AGGF1Q8N302 714 aaeCLIP8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 RNF10Q8N5U6 811 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TRPV3Q8NET8 790 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 SARAFQ96BY9 339 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 SCYL1Q96KG9 808 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 LDAHQ9H6V9 325 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 EXO5Q9H790 373 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 SEMA4BQ9NPR2 832 aaPredicted RBP8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 PRTFDC1Q9NRG1 225 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TAS2R13Q9NYV9 303 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 ZKSCAN5Q9Y2L8 839 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 MAD1L1Q9Y6D9 718 aa8.36□□□□□ -1.07
HNRNPC-227ENST00000556897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TRGV5A0A0B4J1U4 118 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 PABPN1LA6NDY0 278 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM47E-STBD1D6RA91 191 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 CLDN4O14493 209 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 NRDCO43847 1150 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 ATE1O95260 518 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 RAF1P04049 648 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 IFNA16P05015 189 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SERPINA6P08185 405 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 INHBBP09529 407 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 CCL3P10147 92 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 MLNP12872 115 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 PTMSP20962 102 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 ENDOUP21128 410 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SAT1P21673 171 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 BMP5P22003 454 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 GABRB3P28472 473 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 ADSLP30566 484 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 PEX19P40855 299 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 HK2P52789 917 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 PGGT1BP53609 377 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 AP1S2P56377 157 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 HSD17B7P56937 341 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 KEAP1Q14145 624 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SLC10A1Q14973 349 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 HYAL4Q2M3T9 481 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FLYWCH1Q4VC44 716 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 RBM20Q5T481 1227 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 RIPPLY2Q5TAB7 128 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TMEM198Q66K66 360 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 HSDL2Q6YN16 418 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TAOK1Q7L7X3 1001 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TMPRSS11BQ86T26 416 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM47BQ8NA70 645 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 GOLM1Q8NBJ4 401 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FAM222BQ8WU58 562 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FBXL8Q96CD0 374 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 FAR2Q96K12 515 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 C18orf12Q96KH6 178 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SERPINB12Q96P63 405 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 AIF1LQ9BQI0 150 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms