RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ZNF595Q8IYB9 648 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 L3MBTL4Q8NA19 623 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 FAM47BQ8NA70 645 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 BRIX1Q8TDN6 353 aaKnown RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 TSLPQ969D9 159 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 PNPLA2Q96AD5 504 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 CDK15Q96Q40 435 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 WDR77Q9BQA1 342 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 ERVK-6Q9BXR3 956 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 DMRT3Q9NQL9 472 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 PRTFDC1Q9NRG1 225 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 TMEM216Q9P0N5 145 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 SNX6Q9UNH7 406 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 B3GNT3Q9Y2A9 372 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 RNF11Q9Y3C5 154 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 TSC22D4Q9Y3Q8 395 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 ARHGAP10A1A4S6 786 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 BLACEA4D250 179 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 CCDC151A5D8V7 595 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 OR7A17O14581 309 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 RPS17P08708 135 aaKnown RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 MAOAP21397 527 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 HIST1H1TP22492 207 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 TLX1P31314 330 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 HSD17B7P56937 341 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 STX4Q12846 297 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 MFAP5Q13361 173 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 RASA2Q15283 850 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 C4orf17Q53FE4 359 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 DEPDC1Q5TB30 811 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 FRG2Q64ET8 278 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 SLC6A19Q695T7 634 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 PLAG1Q6DJT9 500 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 OR4C11Q6IEV9 310 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 IGFL3Q6UXB1 125 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 C7orf57Q8NEG2 295 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 OR52B6Q8NGF0 335 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 SUN3Q8TAQ9 357 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF483Q8TF39 744 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 QRFPRQ96P65 431 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 FRG2BQ96QU4 278 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 SERPINI1Q99574 410 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 OR51B5Q9H339 312 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 KCNK13Q9HB14 408 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 ZBTB20Q9HC78 741 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-207ENST00000556831 LYRM4Q9HD34 91 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 MS4A12Q9NXJ0 267 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 AHSPQ9NZD4 102 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 LUZP4Q9P127 313 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 PHF11Q9UIL8 331 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 DAPP1Q9UN19 280 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 DOCK10Q96BY6 2186 aa13.24□□□□□ -0.29
SLIRP-207ENST00000556831 FLNCQ14315 2725 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 A8MUI8 341 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 ERLIN1O75477 346 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 MLYCDO95822 493 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 IFNA16P05015 189 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NUDT17P0C025 328 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 KRT4P19013 534 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 CPN2P22792 545 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 HMOX2P30519 316 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 BUD31P41223 144 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-207ENST00000556831 CD97P48960 835 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 ARFIP1P53367 373 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 LIM2P55344 173 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NAA20P61599 178 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF33BQ06732 778 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 Q0VFX4 171 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 RUNX2Q13950 521 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 CFAP157Q5JU67 520 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NUDT13Q86X67 352 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 ACOT4Q8N9L9 421 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 DNAJB14Q8TBM8 379 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 M1APQ8TC57 530 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
SLIRP-207ENST00000556831 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
SLIRP-207ENST00000556831 LMF1Q96S06 567 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 WDR41Q9HAD4 459 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
SLIRP-207ENST00000556831 FBXW2Q9UKT8 454 aa13.23□□□□□ -0.29
SLIRP-207ENST00000556831 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms