RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FBXW2Q9UKT8 454 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 DAPP1Q9UN19 280 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 ATMQ13315 3056 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 AZIN1O14977 448 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 ITM2AO43736 263 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 IGHEP01854 428 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 SERPINE1P05121 402 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 UROSP10746 265 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 IL10P22301 178 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 JAK1P23458 1154 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 HNRNPFP52597 415 aaKnown RBP16.47■□□□□ 0.23
SHMT2-225ENST00000556798 RHAGQ02094 409 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 CSTF3Q12996 717 aaKnown RBP16.47■□□□□ 0.23
SHMT2-225ENST00000556798 SLAMF1Q13291 335 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 KANK2Q63ZY3 851 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 KIRREL2Q6UWL6 708 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 LANCL3Q6ZV70 420 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 NUDT13Q86X67 352 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 EFCAB3Q8N7B9 438 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 TMEM52Q8NDY8 209 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 EML4Q9HC35 981 aaKnown RBP16.47■□□□□ 0.23
SHMT2-225ENST00000556798 PTGDR2Q9Y5Y4 395 aa16.47■□□□□ 0.23
SHMT2-225ENST00000556798 TNRC6AQ8NDV7 1962 aaKnown RBP16.47■□□□□ 0.23
SHMT2-225ENST00000556798 A0A0A6YYD5 115 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 PEX12O00623 359 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TMPRSS11DO60235 418 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 DNAJB5O75953 348 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 HSPA4LO95757 839 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 C8orf89P0DMQ9 161 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 HSD3B1P14060 373 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 MAOAP21397 527 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 HSD3B2P26439 372 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 SERPINB5P36952 375 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TSFMP43897 325 aaKnown RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 ARFIP1P53367 373 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 SLC18A1P54219 525 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 HNRNPH2P55795 449 aaKnown RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 BTG2P78543 158 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 GALNT1Q10472 559 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TBL3Q12788 808 aaKnown RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TUBB8Q3ZCM7 444 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 SH2D4BQ5SQS7 431 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 BORAQ6PGQ7 559 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 METTL4Q8N3J2 472 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TTC9Q92623 222 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 TRIM55Q9BYV6 548 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 DDX31Q9H8H2 851 aaKnown RBP16.46■□□□□ 0.23
SHMT2-225ENST00000556798 LYRM4Q9HD34 91 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 VPS29Q9UBQ0 182 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 FBXL4Q9UKA2 621 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 KCNMB2Q9Y691 235 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 CROCCQ5TZA2 2017 aa16.46■□□□□ 0.23
SHMT2-225ENST00000556798 IGHV3-20A0A0C4DH32 117 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 HMGB1P1B2RPK0 211 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-225ENST00000556798 CYR61O00622 381 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 PRKRAO75569 313 aaKnown RBP16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ITGB2P05107 769 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 KLK1P06870 262 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ACPPP15309 386 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 RHDQ02161 417 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 BTKQ06187 659 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 LINC00303Q3SY05 128 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 CYP20A1Q6UW02 462 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 TMEM205Q6UW68 189 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 COMMD6Q7Z4G1 85 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 CLNKQ7Z7G1 428 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 C1orf52Q8N6N3 182 aaKnown RBP16.45■□□□□ 0.22
SHMT2-225ENST00000556798 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 GBP7Q8N8V2 638 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-225ENST00000556798 OR11G2Q8NGC1 345 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ADAMTS18Q8TE60 1221 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 METTL21AQ8WXB1 218 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 APIPQ96GX9 242 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 PTCHD1Q96NR3 888 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ACBD3Q9H3P7 528 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 AHSPQ9NZD4 102 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ZDHHC2Q9UIJ5 367 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 TRAF6Q9Y4K3 522 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 ZFYVE26Q68DK2 2539 aa16.45■□□□□ 0.22
SHMT2-225ENST00000556798 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 PRMT3O60678 531 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 COX6A1P12074 109 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 CPN2P22792 545 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 TPP2P29144 1249 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-225ENST00000556798 ABCE1P61221 599 aaKnown RBP16.44■□□□□ 0.22
SHMT2-225ENST00000556798 ZNF33BQ06732 778 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 BST1Q10588 318 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 NSDHLQ15738 373 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 IMPG1Q17R60 797 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 QSOX2Q6ZRP7 698 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 ANKRD37Q7Z713 158 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 GPR180Q86V85 440 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 TWIST2Q8WVJ9 160 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 APOBEC4Q8WW27 367 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms