RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SCRG1O75711 98 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 LRATO95237 230 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 NPPAP01160 153 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 GBAP04062 536 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 PGRP06401 933 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 KLK3P07288 261 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 IL3P08700 152 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CD63P08962 238 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 NR2F6P10588 404 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 RNH1P13489 461 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 IL1RNP18510 177 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DDCP20711 480 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CERS1P27544 350 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ALDH9A1P49189 494 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 NOVA1P51513 510 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 RAB38P57729 211 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 SIM1P81133 766 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 PTGR1Q14914 329 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 MAPKAPK3Q16644 382 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DCAF12Q5T6F0 453 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 FAM219BQ5XKK7 198 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 MRM1Q6IN84 353 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 RHBDD2Q6NTF9 364 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DHRS13Q6UX07 377 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF793Q6ZN11 406 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 RAB11FIP2Q7L804 512 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 YTHDF3Q7Z739 585 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 SNX32Q86XE0 403 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 GALNT15Q8N3T1 639 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 OR9A4Q8NGU2 314 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CLHC1Q8NHS4 586 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZFP28Q8NHY6 868 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 WDR36Q8NI36 951 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 TANKQ92844 425 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 GFM2Q969S9 779 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 CLIP3Q96DZ5 547 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ITCHQ96J02 903 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 OR52E6Q96RD3 313 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 TAAR9Q96RI9 348 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DPH2Q9BQC3 489 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 RTKNQ9BST9 563 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DUSP26Q9BV47 211 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 SORBS1Q9BX66 1292 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF717Q9BY31 904 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 BHLHE41Q9C0J9 482 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ACTR5Q9H9F9 607 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF304Q9HCX3 659 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 FAM120CQ9NX05 1096 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 SIDT1Q9NXL6 827 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 DAPP1Q9UN19 280 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 LOXL2Q9Y4K0 774 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ASB4Q9Y574 426 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 PCDHA9Q9Y5H5 950 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF780BQ9Y6R6 833 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 USP34Q70CQ2 3546 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ASCC3Q8N3C0 2202 aaKnown RBP8.73□□□□□ -1.01
ACTN1-218ENST00000556343 HEATR5BQ9P2D3 2071 aa8.73□□□□□ -1.01
ACTN1-218ENST00000556343 ZFHX2Q9C0A1 2572 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 RP1P56715 2156 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 GABRR3A8MPY1 467 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 SGK494L7N484 410 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 PLD2O14939 933 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ANKRD28O15084 1053 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 CHST10O43529 356 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 HCRTR1O43613 425 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TMPRSS11DO60235 418 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 CPNE3O75131 537 aaKnown RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 UBOX5O94941 541 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 KRT16P08779 473 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 FURINP09958 794 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 FBLP22087 321 aaKnown RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TACR1P25103 407 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 NTSP30990 170 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 LIM2P55344 173 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TNFRSF17Q02223 184 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ABHD18Q0P651 414 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 BNIP1Q12981 228 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 RUNX2Q13950 521 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 RCAN2Q14206 197 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 C16orf72Q14CZ0 275 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 FAM174BQ3ZCQ3 159 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 VPS26BQ4G0F5 336 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 NDUFAF5Q5TEU4 345 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ARHGAP40Q5TG30 622 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 HES3Q5TGS1 186 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 OR52E8Q6IFG1 317 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 C16orf89Q6UX73 402 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 GK5Q6ZS86 529 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 CAMKMTQ7Z624 323 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 B3GNT8Q7Z7M8 397 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TREML1Q86YW5 311 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TICAM1Q8IUC6 712 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 RIMKLAQ8IXN7 391 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF595Q8IYB9 648 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 CA13Q8N1Q1 262 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TRIML2Q8N7C3 387 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 OR8J2Q8NGG1 315 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms