RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ARMCX4Q5H9R4 360 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ATP1A1-AS1Q5TC04 95 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM270Q6UE05 265 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 SIGLEC15Q6ZMC9 328 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 C15orf52Q6ZUT6 534 aaKnown RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 KCTD9Q7L273 389 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 CCDC83Q8IWF9 413 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ZBED8Q8IZ13 594 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 SLC22A15Q8IZD6 547 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 SUMF1Q8NBK3 374 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 AQP11Q8NBQ7 271 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 KIAA0895Q8NCT3 520 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 OR5T2Q8NGG2 359 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 OR6S1Q8NH40 331 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 UBLCP1Q8WVY7 318 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF559Q9BR84 538 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 NYXQ9GZU5 481 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ZDHHC6Q9H6R6 413 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 RPF1Q9H9Y2 349 aaKnown RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 RNPEPL1Q9HAU8 725 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 PDRG1Q9NUG6 133 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 TEX10Q9NXF1 929 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 CTSZQ9UBR2 303 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 SATB2Q9UPW6 733 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF510Q9Y2H8 683 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 COLEC10Q9Y6Z7 277 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ARID2Q68CP9 1835 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF732B4DXR9 585 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 NPIPB9F8W1W9 429 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 G3V2L1 256 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 RTCAO00442 366 aaKnown RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 SURF4O15260 269 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 KINO60870 393 aaKnown RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 RTN2O75298 545 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 AKAP3O75969 853 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 PRKAR1AP10644 381 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 SERPINB6P35237 376 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 KIAA1024LP59773 190 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 CD300CQ08708 224 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 GPR50Q13585 617 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 RCN2Q14257 317 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 STXBP2Q15833 593 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 PRR30Q53SZ7 412 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 FGD3Q5JSP0 725 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 SPANXN4Q5MJ08 99 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 LRRC38Q5VT99 294 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 PLPP4Q5VZY2 271 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 KCTD11Q693B1 232 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 PLBD1Q6P4A8 553 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 FRRS1Q6ZNA5 592 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 TRMT11Q7Z4G4 463 aaKnown RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 CCDC91Q7Z6B0 441 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 ASPGQ86U10 573 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 SNX32Q86XE0 403 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 LAX1Q8IWV1 398 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 UNC45BQ8IWX7 931 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 DND1Q8IYX4 353 aaKnown RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 C10orf53Q8N6V4 93 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 TCEANCQ8N8B7 351 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 OR4D10Q8NGI6 311 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 CHURC1Q8WUH1 139 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 CDKN2AIPNLQ96HQ2 116 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 IL12RB2Q99665 862 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 IDI2Q9BXS1 227 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 NACAP1Q9BZK3 213 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 RSPH9Q9H1X1 276 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 MTHFD2LQ9H903 347 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-218ENST00000556256 MED20Q9H944 212 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 SPG21Q9NZD8 308 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 POLKQ9UBT6 870 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 GMEB2Q9UKD1 530 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 VSIG4Q9Y279 399 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 TMED7Q9Y3B3 224 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 WIPI2Q9Y4P8 454 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 CSNK1G3Q9Y6M4 447 aa2.42□□□□□ -2.02
SCFD1-218ENST00000556256 IGHV3-20A0A0C4DH32 117 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 hCG_38984A0A1B0GV85 526 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 A0A1W2PRV1 198 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 MAGEB16A2A368 324 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SMIM30A4D0T7 59 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 LMO7DNF2Z398 122 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 K7EQD1 137 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 MAGEB2O15479 319 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 P2RX6O15547 441 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 LRCH4O75427 683 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 CLN5O75503 358 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 NXPH4O95158 308 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 LETM1O95202 739 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 IGHEP01854 428 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 VDRP11473 427 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 ATP6V1B1P15313 513 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SELEP16581 610 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 C4BPBP20851 252 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 TSFMP43897 325 aaKnown RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SERPINH1P50454 418 aaKnown RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SLC34A1Q06495 639 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SLC3A1Q07837 685 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 ABRQ12979 859 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 LASP1Q14847 261 aaKnown RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 RPS6KA1Q15418 735 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms