RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 HIST2H2AA3Q6FI13 130 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CHERPQ8IWX8 916 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 ZFP62Q8NB50 900 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 OR8K3Q8NH51 312 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 UBTD2Q8WUN7 234 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CCT6BQ92526 530 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 DAZLQ92904 295 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CCDC77Q9BR77 488 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 TBCDQ9BTW9 1192 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CD244Q9BZW8 370 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 RAB17Q9H0T7 212 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PRDM7Q9NQW5 492 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 NUDT4Q9NZJ9 180 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CD274Q9NZQ7 290 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 VTI1BQ9UEU0 232 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 TINAGQ9UJW2 476 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 ZNF223Q9UK11 482 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 RNF112Q9ULX5 631 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PYCARDQ9ULZ3 195 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 YARS2Q9Y2Z4 477 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 E9PLN8 166 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ITGA10O75578 1167 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ZFAND5O76080 213 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 S100BP04271 92 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 CD22P20273 847 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 HTR1EP28566 365 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 CRABP2P29373 138 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ARFIP1P53367 373 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 SRSF11Q05519 484 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 SERTAD2Q14140 314 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 CAPN12Q6ZSI9 719 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ZNF572Q7Z3I7 529 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ISCA2Q86U28 154 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 LAS2Q8IYD9 372 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 CYP4Z2PQ8N1L4 340 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 SPATA6LQ8N4H0 392 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 TMEM156Q8N614 296 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 MORN4Q8NDC4 146 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 TMEM52Q8NDY8 209 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 NCLNQ969V3 563 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 UNKQ9C0B0 810 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 COPS7BQ9H9Q2 264 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 NMRAL1Q9HBL8 299 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 PNO1Q9NRX1 252 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 KCMF1Q9P0J7 381 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ADGRE2Q9UHX3 823 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 TSC22D4Q9Y3Q8 395 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 ASB1Q9Y576 335 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 DCHS2Q6V1P9 2916 aa11.83□□□□□ -0.52
HNRNPC-221ENST00000555883 TMEM200CA6NKL6 621 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 A8MUA0 341 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 PRRG2O14669 202 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 KERAO60938 352 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 TUBB4AP04350 444 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SLC35E2BP0CK96 405 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 PRF1P14222 555 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 ABOP16442 354 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 CERS1P27544 350 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SSR4P51571 173 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 HNRNPFP52597 415 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 IRF8Q02556 426 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 CHIT1Q13231 466 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 BIKQ13323 160 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 TBC1D1Q86TI0 1168 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 DOLPP1Q86YN1 238 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SULF2Q8IWU5 870 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 MCEMP1Q8IX19 187 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 FAM47BQ8NA70 645 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 RHEBL1Q8TAI7 183 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 FBXO25Q8TCJ0 367 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 DMRTA2Q96SC8 542 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 ATOH8Q96SQ7 321 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 MS4A8Q9BY19 250 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 TSPAN10Q9H1Z9 355 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 TIMMDC1Q9NPL8 285 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 MYOTQ9UBF9 498 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SH3BGRL2Q9UJC5 107 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 FBXW2Q9UKT8 454 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 CLCA3PQ9Y6N3 262 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 SPACA6W5XKT8 324 aa11.82□□□□□ -0.52
HNRNPC-221ENST00000555883 CSMD2Q7Z408 3487 aa11.81□□□□□ -0.52
HNRNPC-221ENST00000555883 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
HNRNPC-221ENST00000555883 A0A0G2JN53 185 aa11.81□□□□□ -0.52
HNRNPC-221ENST00000555883 SYCE1LA8MT33 242 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms