RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SCYL1Q96KG9 808 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 GPR78Q96P69 363 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 TBCDQ9BTW9 1192 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 DEFB126Q9BYW3 111 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 ACTR8Q9H981 624 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 PRDM7Q9NQW5 492 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 SPACA6W5XKT8 324 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 HIVEP3Q5T1R4 2406 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 USP9YO00507 2555 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 A0A087WUV0 522 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 TRBV11-1A0A0K0K1C0 115 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 A1L4Q6 167 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 LRRC14BA6NHZ5 514 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 TGFBR3LH3BV60 316 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 SAP18O00422 153 aaKnown RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 SSR2P43308 183 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 CLCN2P51788 898 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 TDGF1P3P51864 188 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 SRSF11Q05519 484 aaKnown RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 PCDH1Q08174 1060 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 GTF2H2Q13888 395 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 AP5B1Q2VPB7 878 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF324BQ6AW86 544 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 SPINK14Q6IE38 97 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 GTF2H2CQ6P1K8 395 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF793Q6ZN11 406 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 UBE3DQ7Z6J8 389 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 RNF175Q8N4F7 328 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 HORMAD2Q8N7B1 307 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 MDS2Q8NDY4 140 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 CMTM7Q96FZ5 175 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 HES7Q9BYE0 225 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 OR51B5Q9H339 312 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 ADAP2Q9NPF8 381 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
NEDD1-208ENST00000555806 TNPO3Q9Y5L0 923 aaKnown RBP17.21■□□□□ 0.35
NEDD1-208ENST00000555806 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 CYR61O00622 381 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 KLK8O60259 260 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 SIX3O95343 332 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 IFNA16P05015 189 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 RBP1P09455 135 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 ATP5A1P25705 553 aaKnown RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 CNTFP26441 200 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 TPP2P29144 1249 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 EEF1DP29692 281 aaKnown RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 ARL1P40616 181 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 MAGEA12P43365 314 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PIK3CGP48736 1102 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 KCNK10P57789 538 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PHEXP78562 749 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 STX4Q12846 297 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PCBP2Q15366 365 aaKnown RBP eCLIP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 TERF2Q15554 542 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 KHDRBS2Q5VWX1 349 aaKnown RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 LIPJQ5W064 366 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 GFRALQ6UXV0 394 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 GOLGA7Q7Z5G4 137 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PTGR2Q8N8N7 351 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 ACOT4Q8N9L9 421 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 TMEM178AQ8NBL3 297 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 HUS1BQ8NHY5 278 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 THAP3Q8WTV1 239 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 NCLNQ969V3 563 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 ISL2Q96A47 359 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 MAPKAP1Q9BPZ7 522 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 CENPKQ9BS16 269 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 IPPKQ9H8X2 491 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 LYRM4Q9HD34 91 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 DMRT3Q9NQL9 472 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 LRFN1Q9P244 771 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 XPR1Q9UBH6 696 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PLEKHB1Q9UF11 243 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-208ENST00000555806 ADGRE2Q9UHX3 823 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 PCDHGA11Q9Y5H2 935 aa17.2■□□□□ 0.34
NEDD1-208ENST00000555806 SVILO95425 2214 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 SPTAN1Q13813 2472 aaKnown RBP17.19■□□□□ 0.34
NEDD1-208ENST00000555806 MYOCOSA0A1B0GUC4 107 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 EXOC1LA0A1B0GW35 172 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 SYNDIG1LA6NDD5 238 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 FCHO1O14526 889 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 LRRTM2O43300 516 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 LDLRP01130 860 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 HIST1H1TP22492 207 aaPredicted RBP17.19■□□□□ 0.34
NEDD1-208ENST00000555806 MLF1P58340 268 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 C4orf17Q53FE4 359 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 ZNF468Q5VIY5 522 aaPredicted RBP17.19■□□□□ 0.34
NEDD1-208ENST00000555806 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 APCDD1LQ8NCL9 501 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 DCAKDQ8WVC6 231 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 ATP6V1E2Q96A05 226 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 REPS1Q96D71 796 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 PHF21BQ96EK2 531 aa17.19■□□□□ 0.34
NEDD1-208ENST00000555806 VMP1Q96GC9 406 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms