RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 LRFN1Q9P244 771 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 KCNN3Q9UGI6 736 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 CLDN16Q9Y5I7 305 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 TCRBV9S1A1TA0A576 114 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 NKX2-6A6NCS4 301 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 LRIT2A6NDA9 550 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 FAM159BA6NKW6 160 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 FOXO6A8MYZ6 492 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CDK2AP1O14519 115 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 EIF3HO15372 352 aaKnown RBP eCLIP10.08□□□□□ -0.8
TDP1-212ENST00000555565 ERI3O43414 337 aaKnown RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 RAD51CO43502 376 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 SLC25A12O75746 678 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 CD1DP15813 335 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 HSPA7P48741 367 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 HNRNPFP52597 415 aaKnown RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 GPX6P59796 221 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ADAM8P78325 824 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CALCOCO2Q13137 446 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 OR4D1Q15615 310 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ZKSCAN8Q15776 578 aaPredicted RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 MAPKAPK3Q16644 382 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ADPRMQ3LIE5 342 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CDKL4Q5MAI5 379 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ADNP2Q6IQ32 1131 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CYS1Q717R9 158 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 VN1R5Q7Z5H4 357 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 PRIMA1Q86XR5 153 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 GPSM1Q86YR5 675 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 SCUBE1Q8IWY4 988 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 KRT78Q8N1N4 520 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 TMEM52Q8NDY8 209 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ARMC2Q8NEN0 867 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 SPATA4Q8NEY3 305 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 TTLQ8NG68 377 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 CCT6BQ92526 530 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ESAMQ96AP7 390 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 FAR2Q96K12 515 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 UBXN10Q96LJ8 280 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 QRFPRQ96P65 431 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 GPR22Q99680 433 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 RBBP8Q99708 897 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CPNE1Q99829 537 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 SMR3AQ99954 134 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ZNF559Q9BR84 538 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 CAPS2Q9BXY5 557 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 EHD1Q9H4M9 534 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 NT5DC2Q9H857 520 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 DNAJC11Q9NVH1 559 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ZNF358Q9NW07 568 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 WWOXQ9NZC7 414 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 GPRC5BQ9NZH0 403 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 ZNF490Q9ULM2 529 aaPredicted RBP10.08□□□□□ -0.8
TDP1-212ENST00000555565 PPT2Q9UMR5 302 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 MMACHCQ9Y4U1 282 aa10.08□□□□□ -0.8
TDP1-212ENST00000555565 INTS1Q8N201 2190 aaKnown RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 TRBV11-1A0A0K0K1C0 115 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ANKDD1BA6NHY2 528 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 NME2P1O60361 137 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 CLEC3AO75596 197 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 STK16O75716 305 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ABOP16442 354 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 STMN1P16949 149 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 EPORP19235 508 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 CD22P20273 847 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 NME2P22392 152 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 GSTM2P28161 218 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 PPP2R1BP30154 601 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 TRHRP34981 398 aaPredicted RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 GMPRP36959 345 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 GP5P40197 560 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 KCNC1P48547 511 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 CYB561P49447 251 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 HLCSP50747 726 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 GPR143P51810 404 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 PLA2G16P53816 162 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 RAB38P57729 211 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ATP6V0D1P61421 351 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 PPP2R2AP63151 447 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 FOLH1Q04609 750 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 DOC2AQ14183 400 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 TERF2Q15554 542 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 SULT1C3Q6IMI6 304 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 C3orf62Q6ZUJ4 267 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 MAATS1Q7Z4T9 603 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 TMEM200AQ86VY9 491 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 GHDCQ8N2G8 530 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 TCAIMQ8N3R3 496 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 B3GNT7Q8NFL0 401 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 OR2L5Q8NG80 312 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 CDKL2Q92772 493 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ARSGQ96EG1 525 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 WDR34Q96EX3 536 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms