RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KCNJ2P63252 427 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 KLC1Q07866 573 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 FOXM1Q08050 763 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CAPRIN1Q14444 709 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 HEPACAMQ14CZ8 416 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 MPEG1Q2M385 716 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 MUM1Q2TAK8 710 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CPTPQ5TA50 214 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 STPG1Q5TH74 334 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 GPR180Q86V85 440 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DEFB107AQ8IZN7 70 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 TSPEARQ8WU66 669 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CIDECQ96AQ7 238 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 MIEF2Q96C03 454 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ZNF501Q96CX3 271 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 SERINC2Q96SA4 455 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CADM1Q9BY67 442 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 TRIM8Q9BZR9 551 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 LRMDAQ9H2I8 198 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ANKHQ9HCJ1 492 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 MIEF1Q9NQG6 463 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 OCIAD1Q9NX40 245 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 LEF1Q9UJU2 399 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 PACSIN3Q9UKS6 424 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 SLC22A7Q9Y694 548 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ZFHX2Q9C0A1 2572 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 BBIP1A8MTZ0 92 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 GSC2O15499 205 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 PROM1O43490 865 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 B3GALT2O43825 422 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 HNRNPCL1O60812 293 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 SCN2BO60939 215 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 RDH16O75452 317 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 SCELO95171 688 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 AIFM1O95831 613 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 KRT16P08779 473 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ANKRD34CP0C6C1 535 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ALAS2P22557 587 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 PDX1P52945 283 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 LIM2P55344 173 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 C21orf58P58505 322 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 SRSF11Q05519 484 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 ZFP36L1Q07352 338 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 NFYCQ13952 458 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 C16orf72Q14CZ0 275 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 MAPKAPK3Q16644 382 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 TCTE1Q5JU00 501 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 C6orf10Q5SRN2 563 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 TTLL10Q6ZVT0 673 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 IKBIPQ70UQ0 350 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ASCL5Q7RTU5 278 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CLECL1Q8IZS7 167 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 GTF2H4Q92759 462 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 EXOSC8Q96B26 276 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 PPCDCQ96CD2 204 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 COQ8BQ96D53 544 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CLPTM1LQ96KA5 538 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 OR6C1Q96RD1 312 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 CSF3RQ99062 836 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DPYSL5Q9BPU6 564 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 INPP5KQ9BT40 448 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DUSP26Q9BV47 211 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 C1orf21Q9H246 121 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 SLC6A13Q9NSD5 602 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 KCMF1Q9P0J7 381 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DHCR7Q9UBM7 475 aaKnown RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 ATP6V1HQ9UI12 483 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 ERVK-11Q9UQG0 969 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 TMEM184BQ9Y519 407 aaPredicted RBP9.66□□□□□ -0.86
SRP54-208ENST00000555557 MAU2Q9Y6X3 613 aa9.66□□□□□ -0.86
SRP54-208ENST00000555557 FITM1A5D6W6 292 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 FAM227AF5H4B4 570 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 GSNP06396 782 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 PCSK2P16519 638 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 CDKN2CP42773 168 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 TRA2BP62995 288 aaKnown RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 ACTN3Q08043 901 aaPredicted RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 PDE7AQ13946 482 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 GRM7Q14831 915 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 NDUFA9Q16795 377 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 SYT16Q17RD7 645 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 GPR135Q8IZ08 494 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 FAM47BQ8NA70 645 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 PCYOX1LQ8NBM8 494 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 OR8J2Q8NGG1 315 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 UTP4Q969X6 686 aaKnown RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 LRRC58Q96CX6 371 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 MMABQ96EY8 250 aaPredicted RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 PRPF18Q99633 342 aaKnown RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 THTPAQ9BU02 230 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 ROGDIQ9GZN7 287 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 ACTR5Q9H9F9 607 aaPredicted RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 WDR41Q9HAD4 459 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 APMAPQ9HDC9 416 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 SERHLQ9NQF3 203 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms