RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RAB28P51157 221 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 IL5RAQ01344 420 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3GQ6DHY5 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3CQ6IPX1 549 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 CCDC80Q76M96 950 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 ADCK2Q7Z695 626 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TBC1D3Q8IZP1 549 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 OR13F1Q8NGS4 319 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 CREB3L4Q8TEY5 395 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 EPYCQ99645 322 aa23.13■■□□□ 1.29
TMEM260-207ENST00000555497 TEX10Q9NXF1 929 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 SCHIP1Q9P0W5 487 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF701M0R085 212 aaPredicted RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 AXIN1O15169 862 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 UGT2B11O75310 529 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 MATN1P21941 496 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 DOK1Q99704 481 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 RUBCNLQ9H714 662 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF451Q9Y4E5 1061 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 TESMINQ9Y4I5 508 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 SPTBN5Q9NRC6 3674 aaKnown RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 XPNPEP2O43895 674 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 B4GALT2O60909 372 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 KRT75O95678 551 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 ARAFP10398 606 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 HOXB3P14651 431 aaPredicted RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 RPS26P62854 115 aaKnown RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 PAGE2Q7Z2X7 111 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 TTC29Q8NA56 475 aaPredicted RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 ATG16L2Q8NAA4 619 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 BPIFB6Q8NFQ5 453 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 OR52E1Q8NGJ3 308 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 RGMAQ96B86 450 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 TEFMQ96QE5 360 aaKnown RBP23.12■■□□□ 1.29
TMEM260-207ENST00000555497 MACROD1Q9BQ69 325 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 TUBA1CQ9BQE3 449 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 FGF22Q9HCT0 170 aa23.12■■□□□ 1.29
TMEM260-207ENST00000555497 H3BMQ9 156 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 SERPIND1P05546 499 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 TTKP33981 857 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 PCBP3P57721 371 aaKnown RBP23.11■■□□□ 1.29
TMEM260-207ENST00000555497 OR2L8Q8NGY9 312 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 COG8Q96MW5 612 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 PITHD1Q9GZP4 211 aaPredicted RBP23.11■■□□□ 1.29
TMEM260-207ENST00000555497 LHPPQ9H008 270 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 RMI1Q9H9A7 625 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 CD93Q9NPY3 652 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 KRT84Q9NSB2 600 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 PCDHGB3Q9Y5G1 929 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 CCDC88CQ9P219 2028 aa23.11■■□□□ 1.29
TMEM260-207ENST00000555497 PDZK1P1A8MUH7 402 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PTGES3LE9PB15 166 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 TBX19O60806 448 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 KLF8O95600 359 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 GSTM2P28161 218 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 SERPINB1P30740 379 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PLA2G16P53816 162 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PCBP4P57723 403 aaKnown RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 GABARAPL2P60520 117 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF630Q2M218 657 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 CCDC71Q8IV32 467 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 KLHL31Q9H511 634 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 LMCD1Q9NZU5 365 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 KIF17Q9P2E2 1029 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 NDRG4Q9ULP0 352 aaKnown RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 LYVE1Q9Y5Y7 322 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 POM121BA6NF01 834 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 WASHC1A8K0Z3 465 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PRICKLE3O43900 615 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PRAMEF10O60809 474 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 SEC14L2O76054 403 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 HOXB2P14652 356 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 FMO3P31513 532 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 MANFP55145 182 aaKnown RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 TOP3AQ13472 1001 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 KEAP1Q14145 624 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 KRT33BQ14525 404 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 HEPACAMQ14CZ8 416 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 UAP1L1Q3KQV9 507 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 IFI44LQ53G44 452 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 CRB2Q5IJ48 1285 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 WASH2PQ6VEQ5 465 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 NUDT13Q86X67 352 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 RAB42Q8N4Z0 105 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 B4GALNT2Q8NHY0 566 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 JPH3Q8WXH2 748 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 OR5P2Q8WZ92 322 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 EXOSC8Q96B26 276 aaKnown RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 NLNQ9BYT8 704 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 SLC6A20Q9NP91 592 aa23.1■■□□□ 1.29
TMEM260-207ENST00000555497 SIRT3Q9NTG7 399 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.1■■□□□ 1.29
TMEM260-207ENST00000555497 PDPK1O15530 556 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 FUT4P22083 530 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 CTHP32929 405 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 BCL6P41182 706 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 CLDN2P57739 230 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 TCEA2Q15560 299 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 RPE65Q16518 533 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 SAXO2Q658L1 398 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms