RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 EFR3AQ14156 821 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ANGPT1Q15389 498 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 TRIM60Q495X7 471 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 SGO1Q5FBB7 561 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 HDDC2Q7Z4H3 204 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ANKRD46Q86W74 232 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 BBS7Q8IWZ6 715 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF557Q8N988 423 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 L3MBTL4Q8NA19 623 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 CLHC1Q8NHS4 586 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 SELENOMQ8WWX9 145 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 OPALINQ96PE5 141 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 BBS2Q9BXC9 721 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 CHST8Q9H2A9 424 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ELOVL6Q9H5J4 265 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 FZD3Q9NPG1 666 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ING3Q9NXR8 418 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 HS3ST2Q9Y278 367 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 CFAP20Q9Y6A4 193 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 A0A0G2JMP0 313 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 OR6C70A6NIJ9 312 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SCAMP3O14828 347 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SCN2BO60939 215 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 NOS1APO75052 506 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 CCNB2O95067 398 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 POP4O95707 220 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 PDYNP01213 254 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ACADMP11310 421 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 UBL4AP11441 157 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 NAT1P18440 290 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 POLR2CP19387 275 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 GKP32189 559 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 CD70P32970 193 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ATN1P54259 1190 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 AP1S2P56377 157 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 DMC1Q14565 340 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LARS2Q15031 903 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 PDZK1Q5T2W1 519 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 C22orf39Q6P5X5 142 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 METAP1DQ6UB28 335 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TSPAN33Q86UF1 283 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC51BQ86UW2 128 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC5A8Q8N695 610 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LSM14AQ8ND56 463 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 DUSP18Q8NEJ0 188 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 WDR36Q8NI36 951 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 AP2M1Q96CW1 435 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LMLNQ96KR4 655 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TSSK3Q96PN8 268 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 FYTTD1Q96QD9 318 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 OR5M11Q96RB7 305 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 MED18Q9BUE0 208 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 BARHL1Q9BZE3 327 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TRIM39Q9HCM9 518 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 HHATLQ9HCP6 504 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 NDUFB11Q9NX14 153 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 BTNL2Q9UIR0 455 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SSR3Q9UNL2 185 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 BRCA2P51587 3418 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 KCNE1BA0A087WTH5 132 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 PRR23AA6NEV1 266 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ZAR1LA6NP61 321 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 A8MV72 311 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 AP2A2O94973 939 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LRG1P02750 347 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 CSF3P09919 207 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF30P17039 623 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 AMD1P17707 334 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 CCR7P32248 378 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 PPM1AP35813 382 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC6A12P48065 614 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 HMGA2P52926 109 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 NUDT6P53370 316 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 CYP4F8P98187 520 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 PTSQ03393 145 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 KCNC3Q14003 757 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 NCF4Q15080 339 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 IFI44LQ53G44 452 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TMEM201Q5SNT2 666 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LCN1P1Q5VSP4 162 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 MZT2BQ6NZ67 158 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ADGRG2Q8IZP9 1017 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 LGI4Q8N135 537 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 C11orf65Q8NCR3 313 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 OR5H6Q8NGV6 325 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 ASB11Q8WXH4 323 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 AP3S1Q92572 193 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 COQ8BQ96D53 544 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TPD52L3Q96J77 140 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 MND1Q9BWT6 205 aa10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 C11orf54Q9H0W9 315 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-210ENST00000555252 TPT1P8Q9HAU6 139 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms