RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TSEN54Q7Z6J9 526 aaKnown RBP8.46□□□□□ -1.06
TDP1-210ENST00000554976 CARM1Q86X55 608 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 OR52N2Q8NGI0 321 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 FIG4Q92562 907 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 FAM120BQ96EK7 910 aaKnown RBP8.46□□□□□ -1.06
TDP1-210ENST00000554976 SHDQ96IW2 340 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 MACROD1Q9BQ69 325 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 DPH2Q9BQC3 489 aaPredicted RBP8.46□□□□□ -1.06
TDP1-210ENST00000554976 TBCDQ9BTW9 1192 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 CHID1Q9BWS9 393 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 SRMSQ9H3Y6 488 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 EHD3Q9NZN3 535 aa8.46□□□□□ -1.06
TDP1-210ENST00000554976 FAM149AA5PLN7 773 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 E9PQ18 207 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 CPSF4O95639 269 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 HIST1H1TP22492 207 aaPredicted RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 PPIBP23284 216 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 ATP5A1P25705 553 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 SOX11P35716 441 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 MAPK12P53778 367 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 TXNL4AP83876 142 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 DUSP2Q05923 314 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 DMWDQ09019 674 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 ILF3Q12906 894 aaKnown RBP eCLIP8.45□□□□□ -1.062e-6■□□□□ 9.3
TDP1-210ENST00000554976 TCEA2Q15560 299 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 ZNF542PQ5EBM4 170 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.45□□□□□ -1.062e-6■■■■□ 26.1
TDP1-210ENST00000554976 ERICH5Q6P6B1 374 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SPESP1Q6UW49 350 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 CBLL1Q75N03 491 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 PAGE2Q7Z2X7 111 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 NATD1Q8N6N6 113 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SUN3Q8TAQ9 357 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SLC22A18Q96BI1 424 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 KLHDC7BQ96G42 594 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 C10orf90Q96M02 699 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 PRPF18Q99633 342 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 CIB1Q99828 191 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 EFHD1Q9BUP0 239 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 SERHL2Q9H4I8 314 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 TAS2R9Q9NYW1 312 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 CORO2BQ9UQ03 480 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 AURKCQ9UQB9 309 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 PCDHGA2Q9Y5H1 932 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SNX11Q9Y5W9 270 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 OR5K4A6NMS3 321 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 MYO1GB0I1T2 1018 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SH3BP5O60239 455 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 NOBOXO60393 691 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 RECKO95980 971 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SERPINA1P01009 418 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 CKMT2P17540 419 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 BCKDHBP21953 392 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 IL10P22301 178 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 FASP25445 335 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SOX18P35713 384 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 PCBP3P57721 371 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 NXPH1P58417 271 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 VAC14Q08AM6 782 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 KRT33BQ14525 404 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 GRAMD1BQ3KR37 738 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 TOR1AIP1Q5JTV8 583 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 ZNF621Q6ZSS3 439 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 BAHD1Q8TBE0 780 aaPredicted RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 UTP15Q8TED0 518 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 DNASE2BQ8WZ79 361 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 POP5Q969H6 163 aaKnown RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 NEURL3Q96EH8 262 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 SLC47A1Q96FL8 570 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 FCRL4Q96PJ5 515 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 C17orf62Q9BQA9 187 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 AASDHPPTQ9NRN7 309 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 TMEM74BQ9NUR3 256 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 AK5Q9Y6K8 562 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 COL27A1Q8IZC6 1860 aaPredicted RBP8.45□□□□□ -1.06
TDP1-210ENST00000554976 PCDH15Q96QU1 1955 aa8.45□□□□□ -1.06
TDP1-210ENST00000554976 A0A1W2PR48 441 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 A0A1W2PRB8 838 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 OR6C74A6NCV1 312 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PRKD3O94806 890 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 STAMBPO95630 424 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 FAM58BPP0C7Q3 252 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 DRD2P14416 443 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 UQCRC2P22695 453 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 FASLGP48023 281 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PPP1CAP62136 330 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 RACK1P63244 317 aaKnown RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 GK3PQ14409 553 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 FKBP9P1Q75LS8 142 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 DGLUCYQ7Z3D6 616 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 EID3Q8N140 333 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ACOT4Q8N9L9 421 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ICA1LQ8NDH6 482 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 CDC26Q8NHZ8 85 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 OR5P2Q8WZ92 322 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 GAL3ST3Q96A11 431 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PYURFQ96I23 114 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 KCNC2Q96PR1 638 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 SLC35A5Q9BS91 424 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms