RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CRLF3Q8IUI8 442 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 KIRREL3Q8IZU9 778 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 AFAP1L2Q8N4X5 818 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 DNAJB8Q8NHS0 232 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 METTL21AQ8WXB1 218 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 NXNL1Q96CM4 212 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 THAP11Q96EK4 314 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SCYL1Q96KG9 808 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 OR4K3Q96R72 315 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SPNS1Q9H2V7 528 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 C12orf65Q9H3J6 166 aaKnown RBP9.94□□□□□ -0.82
SHMT2-215ENST00000554656 IGSF5Q9NSI5 407 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 FGFR1OP2Q9NVK5 253 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 OXSMQ9NWU1 459 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 STMN3Q9NZ72 180 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SEC14L3Q9UDX4 400 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 TRMT6Q9UJA5 497 aaKnown RBP9.94□□□□□ -0.82
SHMT2-215ENST00000554656 SH3BGRL2Q9UJC5 107 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 NAALAD2Q9Y3Q0 740 aa9.94□□□□□ -0.82
SHMT2-215ENST00000554656 ADGRG4Q8IZF6 3080 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 G3V2L1 256 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CCL21O00585 134 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 TRIM13O60858 407 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CDC123O75794 336 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CRYABP02511 175 aaKnown RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 C8GP07360 202 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 TROVE2P10155 538 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CD1DP15813 335 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 NPPBP16860 134 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 BGNP21810 368 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ATP5F1P24539 256 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 HRH2P25021 359 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CD96P40200 585 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 DNAJB13P59910 316 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 AP2B1P63010 937 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 OCRLQ01968 901 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 DLG1Q12959 904 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 STX3Q13277 289 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CSHL1Q14406 222 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ABRAXAS2Q15018 415 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CHI3L2Q15782 390 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 C3AR1Q16581 482 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 SFT2D3Q587I9 215 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 LIPMQ5VYY2 423 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 PAPD4Q6PIY7 484 aaKnown RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 LCTLQ6UWM7 567 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ASPGQ86U10 573 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 C17orf64Q86WR6 236 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 SLC22A9Q8IVM8 553 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 MCEMP1Q8IX19 187 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ANKS4BQ8N8V4 417 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 MFSD9Q8NBP5 474 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC197Q8NCU1 140 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 PPP1R14CQ8TAE6 165 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 MCOLN3Q8TDD5 553 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 LINGO1Q96FE5 620 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 SCMH1Q96GD3 660 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 PEX11GQ96HA9 241 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 SIKE1Q9BRV8 207 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 TSPAN10Q9H1Z9 355 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 PARVBQ9HBI1 364 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ANKHQ9HCJ1 492 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 MMP25Q9NPA2 562 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 KLHL1Q9NR64 748 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 THAP1Q9NVV9 213 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 ANKRD10Q9NXR5 420 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 XPR1Q9UBH6 696 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 TINAGQ9UJW2 476 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 IKZF3Q9UKT9 509 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 KLF2Q9Y5W3 355 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-215ENST00000554656 F8P00451 2351 aa9.93□□□□□ -0.82
SHMT2-215ENST00000554656 WDR91A4D1P6 747 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 C4orf51C9J302 202 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNHIT1O43257 154 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SLC19A2O60779 497 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SBK3P0C264 359 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 TFEBP19484 476 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 POU3F2P20265 443 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 RGS4P49798 205 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 AGTR2P50052 363 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 HK2P52789 917 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 IL2P60568 153 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 OLR1P78380 273 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 BST1Q10588 318 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SP140Q13342 867 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF460Q14592 562 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 OR1C1Q15619 314 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 BNC2Q6ZN30 1099 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 NCCRP1Q6ZVX7 275 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SPATA21Q7Z572 469 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF227Q86WZ6 799 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 C10orf107Q8IVU9 208 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SIAH3Q8IW03 269 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms