RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MS4A8Q9BY19 250 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 SLC29A3Q9BZD2 475 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 COPS7BQ9H9Q2 264 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PRDM9Q9NQV7 894 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PTGFRNQ9P2B2 879 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 XPR1Q9UBH6 696 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 ADGRE2Q9UHX3 823 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MRPS33Q9Y291 106 aaKnown RBP12.28□□□□□ -0.44
SHMT2-211ENST00000554310 TSC22D4Q9Y3Q8 395 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 MMACHCQ9Y4U1 282 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
SHMT2-211ENST00000554310 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 OR2W5A6NFC9 320 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 PRMT3O60678 531 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 B4GALT2O60909 372 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 DNAJB6O75190 326 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 VPS4BO75351 444 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CELA2AP08217 269 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 ITGAMP11215 1152 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CERS1P27544 350 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 TSFMP43897 325 aaKnown RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 PLA2G16P53816 162 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 RAB38P57729 211 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 OR4D2P58180 307 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 ARG2P78540 354 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 GTF2H2Q13888 395 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 MPP2Q14168 576 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 RCN2Q14257 317 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF169Q14929 603 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 BTBD16Q32M84 506 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 TMEM35AQ53FP2 167 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 GTF2H2CQ6P1K8 395 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CUZD1Q86UP6 607 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 LCA5Q86VQ0 697 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 SIRT6Q8N6T7 355 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 PTGR2Q8N8N7 351 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 ANKRD42Q8N9B4 389 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 OR7G3Q8NG95 312 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 DNAJB14Q8TBM8 379 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 M1APQ8TC57 530 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 REPS1Q96D71 796 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 SCYL1Q96KG9 808 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CNDP1Q96KN2 507 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 PTCHD1Q96NR3 888 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 KCNC2Q96PR1 638 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 MRPL57Q9BQC6 102 aaKnown RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 MRPL46Q9H2W6 279 aaKnown RBP12.27□□□□□ -0.45
SHMT2-211ENST00000554310 ACTR8Q9H981 624 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 VPS4AQ9UN37 437 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 CSAG2Q9Y5P2 127 aa12.27□□□□□ -0.45
SHMT2-211ENST00000554310 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 A0A0G2JN53 185 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 TCRBV16S1A1N1A0A5B0 115 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 FOXO6A8MYZ6 492 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 STX16-NPEPL1H3BU86 382 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 E2F3O00716 465 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 STX16O14662 325 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 TYROBPO43914 113 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 SMIM24O75264 130 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 SCELO95171 688 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 ZWINTO95229 277 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 PCNAP12004 261 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 PIK3CBP42338 1070 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 HSD17B7P56937 341 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 PHEXP78562 749 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 ABHD17BQ5VST6 288 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-211ENST00000554310 LIPJQ5W064 366 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 TIFABQ6ZNK6 161 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 GOLGA7Q7Z5G4 137 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 MYLK4Q86YV6 388 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-211ENST00000554310 SCUBE1Q8IWY4 988 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 CMTM7Q96FZ5 175 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 F2RL3Q96RI0 385 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 CENPKQ9BS16 269 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 TBCDQ9BTW9 1192 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 MMP25Q9NPA2 562 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
SHMT2-211ENST00000554310 ESPL1Q14674 2120 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SPTBN1Q01082 2364 aaKnown RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 TRAV17A0A0B4J275 112 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SAGE2PA6NJ88 616 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 H0YIV9 168 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 CLDN4O14493 209 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms