RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SERPINF2P08697 491 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CELA3BP08861 270 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CLEC2LP0C7M8 214 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 MTHFD2P13995 350 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF182P17025 639 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 OXTRP30559 389 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 UGT2B10P36537 528 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 DHPSP49366 369 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 EIF2B2P49770 351 aaKnown RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PPP5CP53041 499 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CDKN2DP55273 166 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 OLR1P78380 273 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF45Q02386 682 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 HGFACQ04756 655 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 LRRC74AQ0VAA2 488 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SMARCB1Q12824 385 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ITGADQ13349 1161 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 OLIG2Q13516 323 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PDGFRLQ15198 375 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PCBP2Q15366 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TAF1AQ15573 450 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 NFE2Q16621 373 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PFKFB4Q16877 469 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TOR1AIP1Q5JTV8 583 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 C6orf136Q5SQH8 315 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SYT6Q5T7P8 510 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 DEPDC1Q5TB30 811 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CACHD1Q5VU97 1274 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SULT1C3Q6IMI6 304 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CERS6Q6ZMG9 384 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PLEKHG7Q6ZR37 379 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 USP30Q70CQ3 517 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 R3HCC1LQ7Z5L2 792 aaKnown RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PTAR1Q7Z6K3 402 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ADCK1Q86TW2 530 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 IGFN1Q86VF2 1251 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 MON1AQ86VX9 555 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 P2RY8Q86VZ1 359 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CXorf67Q86X51 503 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CMTM8Q8IZV2 173 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CPA6Q8N4T0 437 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ATAD1Q8NBU5 361 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CHDHQ8NE62 594 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 C2orf15Q8WU43 125 aaKnown RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ANKRD49Q8WVL7 239 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 STARD8Q92502 1023 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SNX19Q92543 992 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PIGKQ92643 395 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 KCNJ9Q92806 393 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TMBIM1Q969X1 311 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 MYLPFQ96A32 169 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PTERQ96BW5 349 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TXNDC15Q96J42 360 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 C3orf30Q96M34 536 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 DACH2Q96NX9 599 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 MUS81Q96NY9 551 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SEPT5Q99719 369 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 HGH1Q9BTY7 390 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 FUNDC2Q9BWH2 189 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SLC46A2Q9BY10 475 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SLC29A3Q9BZD2 475 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 LHPPQ9H008 270 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 RACGAP1Q9H0H5 632 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SYNDIG1Q9H7V2 258 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TDP1Q9NUW8 608 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 NLE1Q9NVX2 485 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SLC2A6Q9UGQ3 507 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 TRMT6Q9UJA5 497 aaKnown RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 RPS6KA6Q9UK32 745 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PCTPQ9UKL6 214 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SPAG17Q6Q759 2223 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 A0A1B0GTW7 788 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 LOC100130705A0A1B0GUX0 176 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ATP6AP2A0A1C7CYW4 349 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FAM92AA1XBS5 289 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FAM149AA5PLN7 773 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 NPEPPSL1A6NEC2 478 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PATE3B3GLJ2 98 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 BOLA2-SMG1P6H3BVE0 249 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 H7C0S8 307 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 I6L893 689 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 EIF3FO00303 357 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PLK4O00444 970 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CLDN5O00501 218 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 LSM1O15116 133 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 RAD51BO15315 384 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MAGEB3O15480 346 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 AQP9O43315 295 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SYNCRIPO60506 623 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TPST1O60507 370 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 RAMP2O60895 175 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ATP6AP2O75787 350 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PCDH8O95206 1070 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CCNDBP1O95273 360 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PEX11BO96011 259 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ATXN1LP0C7T5 689 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 LINC00032P0C843 101 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PRPS2P11908 318 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms