RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 VMP1Q96GC9 406 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 SCMH1Q96GD3 660 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 CENPKQ9BS16 269 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 MS4A8Q9BY19 250 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 ACSS3Q9H6R3 686 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 ADAP2Q9NPF8 381 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 PRDM7Q9NQW5 492 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 A0A096LPK6 155 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 TRBV11-1A0A0K0K1C0 115 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 CTNSO60931 367 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 KLHL2O95198 593 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 TBX6O95947 436 aaPredicted RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 IFNA16P05015 189 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 INHBAP08476 426 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 EPORP19235 508 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 ALDH18A1P54886 795 aaKnown RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 PHEXP78562 749 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 PMP22Q01453 160 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 PCDH1Q08174 1060 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 STX4Q12846 297 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 MAPKAPK3Q16644 382 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 KRTCAP3Q53RY4 240 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 C1QL3Q5VWW1 255 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 ADNP2Q6IQ32 1131 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 GALNTL5Q7Z4T8 443 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 MYLK4Q86YV6 388 aaPredicted RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 RELL1Q8IUW5 271 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 CENPLQ8N0S6 344 aaPredicted RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 TEX9Q8N6V9 391 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 ZNF473Q8WTR7 871 aaKnown RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 RELTQ969Z4 430 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 LYRM4Q9HD34 91 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 NINJ2Q9NZG7 142 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 SUCOQ9UBS9 1254 aaKnown RBP16.55■□□□□ 0.24
FOXN3-204ENST00000553840 FBXW2Q9UKT8 454 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 ASB1Q9Y576 335 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 CLCA3PQ9Y6N3 262 aa16.55■□□□□ 0.24
FOXN3-204ENST00000553840 DIDO1Q9BTC0 2240 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 TRGV8A0A0C4DH27 118 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 KIF2AO00139 706 aaPredicted RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 SLC25A12O75746 678 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 CLDN1O95832 211 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 TGFB1P01137 390 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 CTAGE8P0CG41 777 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 MST1P26927 711 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 PIK3CGP48736 1102 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 ST13P50502 369 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 HLCSP50747 726 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 IRF9Q00978 393 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 SETDB1Q15047 1291 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 ELAVL1Q15717 326 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 PFKFB4Q16877 469 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 GLE1Q53GS7 698 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 LIPJQ5W064 366 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 HIST2H2BCQ6DN03 193 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 GRHL2Q6ISB3 625 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 CTAGE4Q8IX94 777 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 TMEM156Q8N614 296 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 APCDD1LQ8NCL9 501 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 OR7G3Q8NG95 312 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 DAZLQ92904 295 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 REPS1Q96D71 796 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 FMO2Q99518 471 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 VPS11Q9H270 941 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 ACTR8Q9H981 624 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 PPIEQ9UNP9 301 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 PCDHGA11Q9Y5H2 935 aa16.54■□□□□ 0.24
FOXN3-204ENST00000553840 TNPO3Q9Y5L0 923 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 UTP20O75691 2785 aaKnown RBP16.54■□□□□ 0.24
FOXN3-204ENST00000553840 ASPDHA6ND91 283 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 CYR61O00622 381 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 NEURL1O76050 574 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ZFAND5O76080 213 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ACSL3O95573 720 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 MTHFD2P13995 350 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 TRHRP34981 398 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 SSR2P43308 183 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 SERPINB9P50453 376 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 HNRNPFP52597 415 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 DDX39BQ13838 428 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 SERTAD2Q14140 314 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ZRSR2Q15696 482 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 KHDRBS2Q5VWX1 349 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 MTFR2Q6P444 385 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ARMC10Q8N2F6 343 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ACOT4Q8N9L9 421 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 TMEM52Q8NDY8 209 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 THAP3Q8WTV1 239 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 NCLNQ969V3 563 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 HES7Q9BYE0 225 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 ALOXE3Q9BYJ1 711 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 TRIM45Q9H8W5 580 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms