RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TSFMP43897 325 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 POLR2JP52435 117 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 CLNS1AP54105 237 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 EMP3P54852 163 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 LIM2P55344 173 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CLDN8P56748 225 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 KCNK10P57789 538 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 RAB15P59190 212 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 MC1RQ01726 317 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 KLC1Q07866 573 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 EIF3IQ13347 325 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 FAM53BQ14153 422 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 SYT16Q17RD7 645 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
CHD8-204ENST00000553622 MFSD4BQ5TF39 518 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 C18orf63Q68DL7 685 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 NIPAL1Q6NVV3 410 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CLNKQ7Z7G1 428 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TMPRSS12Q86WS5 348 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 SNX32Q86XE0 403 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 DSELQ8IZU8 1212 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CA13Q8N1Q1 262 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 GALNT15Q8N3T1 639 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 ARHGEF39Q8N4T4 335 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CPSF7Q8N684 471 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 FITM2Q8N6M3 262 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 POU5F2Q8N7G0 328 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 OR7A2PQ8NGA2 310 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 WDR36Q8NI36 951 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 NUDT8Q8WV74 236 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 PPCDCQ96CD2 204 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TM4SF18Q96CE8 201 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 FAM122AQ96E09 287 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 C11orf24Q96F05 449 aaPredicted RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 PEX11GQ96HA9 241 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TEX37Q96LM6 180 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TAAR9Q96RI9 348 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 BRINP2Q9C0B6 783 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 ZNF385DQ9H6B1 395 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 WDR41Q9HAD4 459 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 ZNF304Q9HCX3 659 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 SDR39U1Q9NRG7 319 aaPredicted RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 MRGBPQ9NV56 204 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 SIRT5Q9NXA8 310 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TEX10Q9NXF1 929 aaPredicted RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 DLL3Q9NYJ7 618 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 ZIM2Q9NZV7 527 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 SH3BP4Q9P0V3 963 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TRPC4Q9UBN4 977 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 ATG4BQ9Y4P1 393 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 B3GALT1Q9Y5Z6 326 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 LOC100653049A0A140TA62 436 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 A0A1W2PR48 441 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 FAM234BA2RU67 622 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 FAM227AF5H4B4 570 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 EBAG9O00559 213 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 SCAMP2O15127 329 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 B4GALT2O60909 372 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 CPNE3O75131 537 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 CDC123O75794 336 aaPredicted RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 KRT34O76011 436 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TNFSF15O95150 251 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 SCELO95171 688 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 AIFM1O95831 613 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 RNH1P13489 461 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 ZNF28P17035 718 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 EFNA1P20827 205 aaPredicted RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 AGXTP21549 392 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 JAK1P23458 1154 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 IL12AP29459 219 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 S100A3P33764 101 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 GSTM5P46439 218 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 DGKQP52824 942 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 RAB38P57729 211 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TRA2BP62995 288 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 GABREP78334 506 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 IRX1P78414 480 aaPredicted RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 TNFRSF17Q02223 184 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 HEPACAMQ14CZ8 416 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 MAPRE2Q15555 327 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 FAM174BQ3ZCQ3 159 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 MMEL1Q495T6 779 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TIGD2Q4W5G0 525 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 CPTPQ5TA50 214 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 NDUFAF5Q5TEU4 345 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TMEM164Q5U3C3 297 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 FAM71E1Q6IPT2 247 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 RHBDD2Q6NTF9 364 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 PRMT9Q6P2P2 845 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 IKBIPQ70UQ0 350 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 R3HCC1LQ7Z5L2 792 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TICAM1Q8IUC6 712 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 GALNT6Q8NCL4 622 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 OR51Q1Q8NH59 317 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 PROKR1Q8TCW9 393 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms