RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PROM1O43490 865 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 B3GALT2O43825 422 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 GALR3O60755 368 aaPredicted RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 LRP3O75074 770 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 GP1BAP07359 652 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ANKRD34CP0C6C1 535 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 MSL3P1P0C860 447 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 PLIN5Q00G26 463 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 FOXM1Q08050 763 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 RUNX2Q13950 521 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ANXA8L1Q5VT79 327 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 TICAM1Q8IUC6 712 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 SCUBE1Q8IWY4 988 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ARHGAP24Q8N264 748 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 DNAJB8Q8NHS0 232 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 N4BP2L2Q92802 583 aaPredicted RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 PPCDCQ96CD2 204 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ZNF764Q96H86 408 aaPredicted RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 MAPKAP1Q9BPZ7 522 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 FAIM2Q9BWQ8 316 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 SPRTNQ9H040 489 aaPredicted RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 PARD6AQ9NPB6 346 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 MIEF1Q9NQG6 463 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 KCMF1Q9P0J7 381 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 FTSJ1Q9UET6 329 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 ATG4BQ9Y4P1 393 aa13.02□□□□□ -0.32
APEX1-205ENST00000553555 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.02□□□□□ -0.32
APEX1-205ENST00000553555 PRSS51A0A1B0GVH4 220 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 A0A1W2PR48 441 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 H3BMH7 237 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 DNAJB6O75190 326 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 KCNH1O95259 989 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 LMNAP02545 664 aaKnown RBP13.02□□□□□ -0.33
APEX1-205ENST00000553555 FOLR1P15328 257 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 IL1RNP18510 177 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 NBL1P41271 181 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 HNRNPFP52597 415 aaKnown RBP13.02□□□□□ -0.33
APEX1-205ENST00000553555 EMP3P54852 163 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 GPR19Q15760 415 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 NDUFA9Q16795 377 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 PRMT9Q6P2P2 845 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 PGM2L1Q6PCE3 622 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 ANKRD46Q86W74 232 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 FAM47BQ8NA70 645 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 VPS37AQ8NEZ2 397 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 UCN3Q969E3 161 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 MIEF2Q96C03 454 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 CLPTM1LQ96KA5 538 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 PAIP1Q9H074 479 aaKnown RBP13.02□□□□□ -0.33
APEX1-205ENST00000553555 ANKHQ9HCJ1 492 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 NCDNQ9UBB6 729 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 BTNL2Q9UIR0 455 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 PCDHA9Q9Y5H5 950 aa13.02□□□□□ -0.33
APEX1-205ENST00000553555 COL27A1Q8IZC6 1860 aaPredicted RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 A0A096LPI6 279 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 C1orf226A1L170 272 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 HYKKA2RU49 373 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 TMEM150CB9EJG8 249 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 ERN1O75460 977 aaKnown RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 MED26O95402 600 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 DDX5P17844 614 aaKnown RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 SLC6A2P23975 617 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 TRPC1P48995 793 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 ALDH9A1P49189 494 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 LIM2P55344 173 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 FAM53BQ14153 422 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 CAPRIN1Q14444 709 aaKnown RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 MPEG1Q2M385 716 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 C6orf10Q5SRN2 563 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 LRIF1Q5T3J3 769 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 C18orf63Q68DL7 685 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 BNC2Q6ZN30 1099 aaPredicted RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 NAXDQ8IW45 347 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 ULK2Q8IYT8 1036 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 NATD1Q8N6N6 113 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 DNAJB14Q8TBM8 379 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 C10orf90Q96M02 699 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 CCDC115Q96NT0 180 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 CGREF1Q99674 301 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 INPP5KQ9BT40 448 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 NPLQ9BXD5 320 aaPredicted RBP13.01□□□□□ -0.33
APEX1-205ENST00000553555 LYRM4Q9HD34 91 aa13.01□□□□□ -0.33
APEX1-205ENST00000553555 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms