RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OASLQ15646 514 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 NSDHLQ15738 373 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 KLHL38Q2WGJ6 581 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ARHGAP11AQ6P4F7 1023 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PPP1R21Q6ZMI0 780 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ADCK2Q7Z695 626 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 LILRA2Q8N149 483 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 AFAP1L2Q8N4X5 818 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 NFAM1Q8NET5 270 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PPHLN1Q8NEY8 458 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 BHLHE22Q8NFJ8 381 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 OR5T3Q8NGG3 340 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 OR52N2Q8NGI0 321 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ABHD4Q8TB40 342 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ATG4AQ8WYN0 398 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 FAM136AQ96C01 138 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 MBD6Q96DN6 1003 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PEX11GQ96HA9 241 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PRAP1Q96NZ9 151 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 GPATCH1Q9BRR8 931 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ZDHHC11Q9H8X9 412 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 CHRAC1Q9NRG0 131 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 FAM114A2Q9NRY5 505 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 DEPPQ9NTK1 212 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 UTP6Q9NYH9 597 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ANAPC5Q9UJX4 755 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PLEKHA6Q9Y2H5 1048 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 MED16Q9Y2X0 877 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 KLF13Q9Y2Y9 288 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PCDHA13Q9Y5I0 950 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 FAM215AQ9Y5M1 114 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 KIAA1549Q9HCM3 1950 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 NBEAL1Q6ZS30 2694 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 NINQ8N4C6 2090 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 IGKV3D-11A0A0A0MRZ8 115 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 A0A0G2JMM0 328 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 A0A0G2JNJ9 132 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 A0A1W2PPB8 328 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 A0A1W2PRS3 328 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 FEZF1A0PJY2 475 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 GRID2IPA4D2P6 1211 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PINLYPA6NC86 204 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF839A8K0R7 811 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 KIR3DP1A8MWS1 328 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PEX1O43933 1283 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 DNAJB6O75190 326 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 NDUFS3O75489 264 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 GAS8O95995 478 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CATP04040 527 aaKnown RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 FHP07954 510 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TPM1P09493 284 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 RAC2P15153 192 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 IL10P22301 178 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 NMBRP28336 390 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 FMO4P31512 558 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 HSD17B2P37059 387 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 FDFT1P37268 417 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 OR4D2P58180 307 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 GPR85P60893 370 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TBPL1P62380 186 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CRADDP78560 199 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PMPCAQ10713 525 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PCID2Q5JVF3 399 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 RTL6Q6ICC9 239 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PAMR1Q6UXH9 720 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 MDGA2Q7Z553 956 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PRUNE1Q86TP1 453 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 BIVMQ86UB2 503 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PRIMA1Q86XR5 153 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CILP2Q8IUL8 1156 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CNGA4Q8IV77 575 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 LIX1LQ8IVB5 337 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 REXO1L1PQ8IX06 675 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ZZZ3Q8IYH5 903 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CLYBLQ8N0X4 340 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 CYP4Z2PQ8N1L4 340 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TC2NQ8N9U0 490 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 APCDD1LQ8NCL9 501 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 WFDC11Q8NEX6 87 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 MCOLN3Q8TDD5 553 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TMEM125Q96AQ2 219 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ARSGQ96EG1 525 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 RMND5BQ96G75 393 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 DHRS1Q96LJ7 313 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 EBNA1BP2Q99848 306 aaKnown RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 SMR3AQ99954 134 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 POLDIP3Q9BY77 421 aaKnown RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ANKHQ9HCJ1 492 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 RASSF1Q9NS23 344 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 PNPLA3Q9NST1 481 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TMEM184CQ9NVA4 438 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 Q9UFV3 132 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF223Q9UK11 482 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-219ENST00000553488 NAALAD2Q9Y3Q0 740 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 LIPGQ9Y5X9 500 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 SLC22A7Q9Y694 548 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms