RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CCNL2Q96S94 520 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-218ENST00000553309 CYP2S1Q96SQ9 504 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 ACOX2Q99424 681 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 SH3GL2Q99962 352 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 SEMA3CQ99985 751 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 KRT23Q9C075 422 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 CLSTN2Q9H4D0 955 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 DCTPP1Q9H773 170 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 POLR1BQ9H9Y6 1135 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 XAB2Q9HCS7 855 aaKnown RBP4.63□□□□□ -1.67
ATXN3-218ENST00000553309 HINT3Q9NQE9 182 aaKnown RBP4.63□□□□□ -1.67
ATXN3-218ENST00000553309 KCND2Q9NZV8 630 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 EMC3Q9P0I2 261 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 NDUFA13Q9P0J0 144 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 ORC3Q9UBD5 711 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-218ENST00000553309 CRNNQ9UBG3 495 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-218ENST00000553309 RASAL2Q9UJF2 1139 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 LAMP5Q9UJQ1 280 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 EXOC7Q9UPT5 735 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 CFL2Q9Y281 166 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 PHLPP2Q6ZVD8 1323 aa4.63□□□□□ -1.67
ATXN3-218ENST00000553309 ANK1P16157 1881 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ZNF638Q14966 1978 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 HIVEP3Q5T1R4 2406 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 LRRK1Q38SD2 2015 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 MYO18AQ92614 2054 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SYNJ2BP-COX16A0A087WUM0 186 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 A0A1W2PNU3 283 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 USO1O60763 962 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 TMCC2O75069 709 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CSO75390 466 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SEC31AO94979 1220 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 LCA5LO95447 670 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PLGP00747 810 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CRYAAP02489 173 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 TUBBP07437 444 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SP1P08047 785 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 KRT7P08729 469 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RHOXF2BP0C7M4 288 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CPA3P15088 417 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PORP16435 677 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ZNF3P17036 446 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 DDX5P17844 614 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 IL10P22301 178 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RPL9P32969 192 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ASMTP46597 345 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CLCNKAP51800 687 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RPL10AP62906 217 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 OLR1P78380 273 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 MRPS15P82914 257 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PLOD1Q02809 727 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ACTN3Q08043 901 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PPP2R5CQ13362 524 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 NAE1Q13564 534 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 TGIF1Q15583 401 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RILPL1Q5EBL4 403 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 OTUD3Q5T2D3 398 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 IL23RQ5VWK5 629 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CENPPQ6IPU0 288 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PLEKHA7Q6IQ23 1121 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SARM1Q6SZW1 724 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ITIH5Q86UX2 942 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 VPS36Q86VN1 386 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ODF3L1Q8IXM7 274 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 OR8H1Q8NGG4 311 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PDCD6IPQ8WUM4 868 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ATL1Q8WXF7 558 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PEX13Q92968 403 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 KLHL29Q96CT2 875 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RBM18Q96H35 190 aaKnown RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CEP170P1Q96L14 293 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CCDC42Q96M95 316 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CATSPER2Q96P56 530 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 NDNQ99608 321 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 RHOXF2Q9BQY4 288 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 HGH1Q9BTY7 390 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 AP1M1Q9BXS5 423 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 GBA3Q9H227 469 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 PDZD7Q9H5P4 517 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 TM9SF3Q9HD45 589 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ZNF71Q9NQZ8 489 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ABCF3Q9NUQ8 709 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ANO10Q9NW15 660 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ERVK-11Q9UQG0 969 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 ANGPTL3Q9Y5C1 460 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 SNX8Q9Y5X2 465 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CYP46A1Q9Y6A2 500 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 CEPT1Q9Y6K0 416 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 UBE4BO95155 1302 aa4.62□□□□□ -1.67
ATXN3-218ENST00000553309 A0A1B0GTQ1 180 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 A0A1B0GVG6 124 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 A0A1W2PQM1 296 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 MSH4O15457 936 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 ZW10O43264 779 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 SHOX2O60902 331 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-218ENST00000553309 TSPAN9O75954 239 aa4.61□□□□□ -1.67
ATXN3-218ENST00000553309 ECDO95905 644 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms