RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 PPP6CO00743 305 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 CLDN4O14493 209 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 CLDN9O95484 217 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SHBGP04278 402 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 PYGBP11216 843 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SLCO1A2P46721 670 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 CCNG1P51959 295 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 CDH13P55290 713 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SRSF11Q05519 484 aaKnown RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 ZRSR2Q15696 482 aaKnown RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 EIF2S3LQ2VIR3 472 aaKnown RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 TMEM35AQ53FP2 167 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SGO1Q5FBB7 561 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 DEPDC1Q5TB30 811 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 FAM219BQ5XKK7 198 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 BEST3Q8N1M1 668 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SRFBP1Q8NEF9 429 aaKnown RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 ARMC2Q8NEN0 867 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SREK1Q8WXA9 508 aaKnown RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 ZBTB26Q9HCK0 441 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SEMA4BQ9NPR2 832 aaPredicted RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 PSMC3IPQ9P2W1 217 aaPredicted RBP15.66■□□□□ 0.1
BRF1-219ENST00000551787 TEKT2Q9UIF3 430 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 PCTPQ9UKL6 214 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 TMCO1Q9UM00 188 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 PCDHGA11Q9Y5H2 935 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 CLDN16Q9Y5I7 305 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 SHANK1Q9Y566 2161 aa15.66■□□□□ 0.1
BRF1-219ENST00000551787 A0A1W2PPM1 405 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 SMIM23A6NLE4 172 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 H0YIV9 168 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 STX16-NPEPL1H3BU86 382 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 STX16O14662 325 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 MYO1DO94832 1006 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 ETHE1O95571 254 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 HIST1H1TP22492 207 aaPredicted RBP15.65■□□□□ 0.1
BRF1-219ENST00000551787 PIK3CBP42338 1070 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 SSR2P43308 183 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 RAP1GDS1P52306 607 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 ID2Q02363 134 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 SRSF1Q07955 248 aaKnown RBP eCLIP15.65■□□□□ 0.1
BRF1-219ENST00000551787 SLAMF1Q13291 335 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 OR4C11Q6IEV9 310 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 H3F3CQ6NXT2 135 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 SCUBE1Q8IWY4 988 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 L3MBTL4Q8NA19 623 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 NFAM1Q8NET5 270 aaPredicted RBP15.65■□□□□ 0.1
BRF1-219ENST00000551787 GRHL3Q8TE85 626 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 RGMAQ96B86 450 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 ZNF354BQ96LW1 612 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 CCDC77Q9BR77 488 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 CDCP1Q9H5V8 836 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 ADGRE2Q9UHX3 823 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 FBXW2Q9UKT8 454 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 MMACHCQ9Y4U1 282 aa15.65■□□□□ 0.1
BRF1-219ENST00000551787 A0A1B0GTL3 188 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 OR5H15A6NDH6 313 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 A8MT66 165 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 UGDHO60701 494 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 LDB3O75112 727 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 PTX3P26022 381 aaPredicted RBP15.64■□□□□ 0.09
BRF1-219ENST00000551787 SERPINB1P30740 379 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 TSFMP43897 325 aaKnown RBP15.64■□□□□ 0.09
BRF1-219ENST00000551787 HSD17B7P56937 341 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 MEP1AQ16819 746 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 OR4N5Q8IXE1 308 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 ZNF595Q8IYB9 648 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 ELP5Q8TE02 316 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 THAP3Q8WTV1 239 aaPredicted RBP15.64■□□□□ 0.09
BRF1-219ENST00000551787 SLC29A3Q9BZD2 475 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 ROGDIQ9GZN7 287 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 ANKZF1Q9H8Y5 726 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 LYRM4Q9HD34 91 aa15.64■□□□□ 0.09
BRF1-219ENST00000551787 MRPS33Q9Y291 106 aaKnown RBP15.64■□□□□ 0.09
BRF1-219ENST00000551787 TRAV17A0A0B4J275 112 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 SAGE2PA6NJ88 616 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 PLPP1O14494 284 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 CTNSO60931 367 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 EEDO75530 441 aaKnown RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 CBX6O95503 412 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 IFNA16P05015 189 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 CD96P40200 585 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 TAS2R50P59544 299 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 PHEXP78562 749 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 STX4Q12846 297 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 TRAF3Q13114 568 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 UBAP2LQ14157 1087 aaKnown RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 RCN2Q14257 317 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 ESPL1Q14674 2120 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 TTC19Q6DKK2 380 aaPredicted RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 METTL2BQ6P1Q9 378 aaKnown RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 MILR1Q7Z6M3 343 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 RPS19BP1Q86WX3 136 aaKnown RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 SLC5A8Q8N695 610 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 EIF1ADQ8N9N8 165 aaKnown RBP15.63■□□□□ 0.09
BRF1-219ENST00000551787 OR4F6Q8NGB9 312 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 PRR7Q8TB68 274 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 ADAMTS18Q8TE60 1221 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 MZB1Q8WU39 189 aa15.63■□□□□ 0.09
BRF1-219ENST00000551787 REPS1Q96D71 796 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms