RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 NAP1L1P55209 391 aaKnown RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 NAE1Q13564 534 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ELAVL1Q15717 326 aaKnown RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ACSF3Q4G176 576 aaPredicted RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 SLC22A10Q63ZE4 541 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 PM20D2Q8IYS1 436 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 UBL4BQ8N7F7 174 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 MORN4Q8NDC4 146 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 TRPV3Q8NET8 790 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ALKBH8Q96BT7 664 aaKnown RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 CAPZA3Q96KX2 299 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 EPB41L4BQ9H329 900 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 LIN28AQ9H9Z2 209 aaKnown RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ZFP64Q9NPA5 681 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 SH2B3Q9UQQ2 575 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ZNF148Q9UQR1 794 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 MRPS33Q9Y291 106 aaKnown RBP14.11□□□□□ -0.15
CACNB3-220ENST00000551716 ATG4BQ9Y4P1 393 aa14.11□□□□□ -0.15
CACNB3-220ENST00000551716 B3GALT4O96024 378 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 PAMP19021 973 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 CTSSP25774 331 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 HK2P52789 917 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 RAB8AP61006 207 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 CRADDP78560 199 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 SLC13A2Q13183 592 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 POU4F3Q15319 338 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 ARMC3Q5W041 872 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 NEPROQ6NW34 567 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 CILP2Q8IUL8 1156 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 SCUBE1Q8IWY4 988 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 CA13Q8N1Q1 262 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 VWA5B2Q8N398 1253 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 SLC30A3Q99726 388 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 NPLQ9BXD5 320 aaPredicted RBP14.1□□□□□ -0.15
CACNB3-220ENST00000551716 PARVBQ9HBI1 364 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 EIF2B3Q9NR50 452 aaKnown RBP14.1□□□□□ -0.15
CACNB3-220ENST00000551716 PRTFDC1Q9NRG1 225 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 RYDENQ9NUL5 291 aaKnown RBP14.1□□□□□ -0.15
CACNB3-220ENST00000551716 JKAMPQ9P055 326 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 PAK5Q9P286 719 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 NDRG3Q9UGV2 375 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 COMMD10Q9Y6G5 202 aa14.1□□□□□ -0.15
CACNB3-220ENST00000551716 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SH3D21A4FU49 640 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 TRIM64A6NGJ6 449 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 TRIM64BA6NI03 449 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CD8B2A6NJW9 211 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 EEF1E1-BLOC1S5C9J1V9 151 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 GOLGA8KD6RF30 607 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 GOLGA8TH3BQL2 631 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 EEF1E1O43324 174 aaKnown RBP14.09□□□□□ -0.15
CACNB3-220ENST00000551716 C8GP07360 202 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 HIST1H2AGP0C0S8 130 aaPredicted RBP14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SMIM10L1P0DMW3 83 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 HIST1H2ADP20671 130 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SCTRP47872 440 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 ZNF136P52737 540 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 KCNJ2P63252 427 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CUL1Q13616 776 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CSHL1Q14406 222 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 KIAA0930Q6ICG6 404 aaPredicted RBP14.09□□□□□ -0.15
CACNB3-220ENST00000551716 HMBOX1Q6NT76 420 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CENPUQ71F23 418 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 PHC2Q8IXK0 858 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 ZNF595Q8IYB9 648 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CCDC170Q8IYT3 715 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 CCDC89Q8N998 374 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 NTNG2Q96CW9 530 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 MFSD3Q96ES6 412 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SNF8Q96H20 258 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SMIM10Q96HG1 83 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 FAR2Q96K12 515 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 HIST1H2AHQ96KK5 128 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 HIST1H2AJQ99878 128 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 H2AFJQ9BTM1 129 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 TSGA10Q9BZW7 698 aa14.09□□□□□ -0.15
CACNB3-220ENST00000551716 ZNF703Q9H7S9 590 aaPredicted RBP14.09□□□□□ -0.15
CACNB3-220ENST00000551716 SEMA4BQ9NPR2 832 aaPredicted RBP14.09□□□□□ -0.15
CACNB3-220ENST00000551716 ZANQ9Y493 2812 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 C15orf38-AP3S2A0A0A6YYH1 394 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 A0A1W2PPR1 153 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 AKR1B15C9JRZ8 316 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 IFNA16P05015 189 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 SERPINA6P08185 405 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 CCL3P10147 92 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 CYLC1P35663 651 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 HNF4AP41235 474 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 RNF4P78317 190 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 SP140Q13342 867 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 RCN2Q14257 317 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 MPEG1Q2M385 716 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 C4orf22Q6V702 233 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 PIWIL4Q7Z3Z4 852 aaKnown RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 VSTM4Q8IW00 320 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 DND1Q8IYX4 353 aaKnown RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 LRRC25Q8N386 305 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-220ENST00000551716 RASGEF1CQ8N431 466 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 TC2NQ8N9U0 490 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms