RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ELK4P28324 431 aa19.92■□□□□ 0.78
PRDM4-205ENST00000550376 CDK9P50750 372 aaKnown RBP19.92■□□□□ 0.78
PRDM4-205ENST00000550376 NDUFAF5Q5TEU4 345 aa19.92■□□□□ 0.78
PRDM4-205ENST00000550376 ASB12Q8WXK4 309 aa19.92■□□□□ 0.78
PRDM4-205ENST00000550376 OSBPL10Q9BXB5 764 aa19.92■□□□□ 0.78
PRDM4-205ENST00000550376 AMBRA1Q9C0C7 1298 aa19.92■□□□□ 0.78
PRDM4-205ENST00000550376 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.92■□□□□ 0.78
PRDM4-205ENST00000550376 TRBC2A0A5B9 178 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 M0QX08 132 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 NME6O75414 186 aaPredicted RBP19.91■□□□□ 0.78
PRDM4-205ENST00000550376 SHMT2P34897 504 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 SLAMF1Q13291 335 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 HEPACAMQ14CZ8 416 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 EIF3MQ7L2H7 374 aaKnown RBP19.91■□□□□ 0.78
PRDM4-205ENST00000550376 TRIML2Q8N7C3 387 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 OR52N2Q8NGI0 321 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 MS4A6EQ96DS6 147 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 KIR3DX1Q9H7L2 352 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 UBE2ZQ9H832 354 aaPredicted RBP19.91■□□□□ 0.78
PRDM4-205ENST00000550376 APOBEC3BQ9UH17 382 aaKnown RBP19.91■□□□□ 0.78
PRDM4-205ENST00000550376 ATG4BQ9Y4P1 393 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 KCNJ13O60928 360 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 CLEC3AO75596 197 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 FABP3P05413 133 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 FUT4P22083 530 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 CERS1P27544 350 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 PPP2R2BQ00005 443 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 SCARB2Q14108 478 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 GPR18Q14330 331 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 FBXO43Q4G163 708 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 TOR1AIP1Q5JTV8 583 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 IKBIPQ70UQ0 350 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 OLIG3Q7RTU3 272 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 EID3Q8N140 333 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 SPPL2AQ8TCT8 520 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 MBOAT4Q96T53 435 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 RAB11FIP5Q9BXF6 653 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 PADI4Q9UM07 663 aa19.91■□□□□ 0.78
PRDM4-205ENST00000550376 GSAPA4D1B5 854 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 PDPK1O15530 556 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 ERAL1O75616 437 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 MAGP20916 626 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 KCNJ10P78508 379 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 APOFQ13790 326 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 VEZF1Q14119 521 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 RPS26P11Q5JNZ5 115 aaPredicted RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 TJAP1Q5JTD0 557 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 GCNT6Q5T4J0 391 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 C18orf63Q68DL7 685 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 OR2T5Q6IEZ7 315 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 DENND6BQ8NEG7 585 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 OR2T29Q8NH02 315 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 MTERF3Q96E29 417 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 NT5DC2Q9H857 520 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 DDX31Q9H8H2 851 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 TMEM184CQ9NVA4 438 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 RPS6KA6Q9UK32 745 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 A0A0A6YYD5 115 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 SUV39H1O43463 412 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 CYP4B1P13584 511 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 F3P13726 295 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 RPL3P39023 403 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 MAGEA2P43356 314 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 RPL5P46777 297 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 PHF7Q9BWX1 381 aaPredicted RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 MRPS26Q9BYN8 205 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 ANKRA2Q9H9E1 313 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 CLK4Q9HAZ1 481 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 AASSQ9UDR5 926 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 OR6C74A6NCV1 312 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 HOXC4P09017 264 aaPredicted RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 CHRNB1P11230 501 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 PVRP15151 417 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 PPIBP23284 216 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 CMPK1P30085 196 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 ZIC1Q15915 447 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 CYP4Z1Q86W10 505 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 HORMAD2Q8N7B1 307 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 ACOT4Q8N9L9 421 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 OR5K1Q8NHB7 308 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 TAMM41Q96BW9 452 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 LMAN1LQ9HAT1 526 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 PRDM7Q9NQW5 492 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 USP36Q9P275 1121 aaKnown RBP19.9■□□□□ 0.78
PRDM4-205ENST00000550376 ZNF451Q9Y4E5 1061 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 HEBP2Q9Y5Z4 205 aa19.9■□□□□ 0.78
PRDM4-205ENST00000550376 FANCMQ8IYD8 2048 aa19.89■□□□□ 0.78
PRDM4-205ENST00000550376 A0A1W2PR48 441 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 A6NCN8 305 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 SH3BP5O60239 455 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 SEMG1P04279 462 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 PCGF2P35227 344 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 CDK6Q00534 326 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 KCNAB2Q13303 367 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 SPDYE7PQ495Y7 208 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 CEACAM20Q6UY09 585 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 RBM44Q6ZP01 1051 aaKnown RBP19.89■□□□□ 0.77
PRDM4-205ENST00000550376 TSEN54Q7Z6J9 526 aaKnown RBP19.89■□□□□ 0.77
PRDM4-205ENST00000550376 HMGN2P46Q86SG4 172 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 NLNQ9BYT8 704 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms