RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RNF11Q9Y3C5 154 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SPACA6W5XKT8 324 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SVILO95425 2214 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 A8MUI8 341 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 RTCAO00442 366 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 OR7A17O14581 309 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 ZIC2O95409 532 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 GSTA1P08263 222 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 TAC1P20366 129 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 HNRNPFP52597 415 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 TRAF3Q13114 568 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 TERF2Q15554 542 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 ZRSR2Q15696 482 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 DEPDC1Q5TB30 811 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 H3F3CQ6NXT2 135 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 RNF175Q8N4F7 328 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 CISD2Q8N5K1 135 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 ACOT4Q8N9L9 421 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 OR52B6Q8NGF0 335 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 RGMAQ96B86 450 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 SNRNP40Q96DI7 357 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF354BQ96LW1 612 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 NSUN5Q96P11 429 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 ANKZF1Q9H8Y5 726 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 HIVEP3Q5T1R4 2406 aa16.15■□□□□ 0.18
CHMP1A-208ENST00000550102 TRAV17A0A0B4J275 112 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 BLACEA4D250 179 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 GOLGA8RI6L899 631 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 SAP18O00422 153 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 CYR61O00622 381 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 OTCP00480 354 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 SHBGP04278 402 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 SBK3P0C264 359 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 TNFSF10P50591 281 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 ARFIP1P53367 373 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 RPS13P62277 151 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 HERVK_113P63132 956 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 ACER2Q5QJU3 275 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 C10orf62Q5T681 223 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 LGI4Q8N135 537 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 TMEM52Q8NDY8 209 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 ZNF483Q8TF39 744 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 MZB1Q8WU39 189 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 HAS2Q92819 552 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 CDK15Q96Q40 435 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 NTMT1Q9BV86 223 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 C1QTNF3Q9BXJ4 246 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 ERVK-6Q9BXR3 956 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 PLA2G3Q9NZ20 509 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 KCMF1Q9P0J7 381 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 TMEM216Q9P0N5 145 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 COPG1Q9Y678 874 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 HECTD1Q9ULT8 2610 aa16.14■□□□□ 0.17
CHMP1A-208ENST00000550102 OR5H15A6NDH6 313 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 FOXE1O00358 373 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PLPP1O14494 284 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 WDPCPO95876 746 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PYGBP11216 843 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PTX3P26022 381 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 CUL3Q13618 768 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 INAQ16352 499 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 MEP1AQ16819 746 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 GGTA1PQ4G0N0 100 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 FRG2Q64ET8 278 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 FCRLBQ6BAA4 426 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 OR4C11Q6IEV9 310 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 CLNKQ7Z7G1 428 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 CRLF3Q8IUI8 442 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 BEST3Q8N1M1 668 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 TMEM151AQ8N4L1 468 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 CATSPER1Q8NEC5 780 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 OR1N1Q8NGS0 311 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 WDR20Q8TBZ3 569 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 ELP5Q8TE02 316 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 C19orf60Q96EN9 201 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 FRG2BQ96QU4 278 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 MAPKAP1Q9BPZ7 522 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 ADAP2Q9NPF8 381 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 SEMA4BQ9NPR2 832 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PNO1Q9NRX1 252 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 AGPAT4Q9NRZ5 378 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 ASF1BQ9NVP2 202 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 STMN3Q9NZ72 180 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PHF11Q9UIL8 331 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 PPT2Q9UMR5 302 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 DOPEY2Q9Y3R5 2298 aa16.13■□□□□ 0.17
CHMP1A-208ENST00000550102 SPTAN1Q13813 2472 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 A8MUA0 341 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 TGFBR3LH3BV60 316 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 MYO1DO94832 1006 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 F10P00742 488 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 GNLYP22749 145 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 ATP5F1P24539 256 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 SLCO1A2P46721 670 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms