RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 KCNAB2Q13303 367 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 ABRAXAS2Q15018 415 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 NSDHLQ15738 373 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 TCHHL1Q5QJ38 904 aaPredicted RBP18.22■□□□□ 0.51
DDX54-207ENST00000550016 QSOX2Q6ZRP7 698 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 NDUFAF7Q7L592 441 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 ZCCHC7Q8N3Z6 543 aaKnown RBP18.22■□□□□ 0.51
DDX54-207ENST00000550016 KCNA7Q96RP8 456 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 DDX31Q9H8H2 851 aaKnown RBP18.22■□□□□ 0.51
DDX54-207ENST00000550016 C19orf25Q9UFG5 118 aaPredicted RBP18.22■□□□□ 0.51
DDX54-207ENST00000550016 SLC12A4Q9UP95 1085 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 MRPS33Q9Y291 106 aaKnown RBP18.22■□□□□ 0.51
DDX54-207ENST00000550016 TIMM22Q9Y584 194 aa18.22■□□□□ 0.51
DDX54-207ENST00000550016 MKRN2OSH3BPM6 223 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 CYR61O00622 381 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 CLDN4O14493 209 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 CRCPO75575 148 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 DNAJB5O75953 348 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 HPP00738 406 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 SERPINB4P48594 390 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 BTG2P78543 158 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 CSTF3Q12996 717 aaKnown RBP18.21■□□□□ 0.51
DDX54-207ENST00000550016 AIMP2Q13155 320 aaKnown RBP18.21■□□□□ 0.51
DDX54-207ENST00000550016 MPP2Q14168 576 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 LY6DQ14210 128 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 FAM219BQ5XKK7 198 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 LANCL3Q6ZV70 420 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 CPEB2Q7Z5Q1 589 aaKnown RBP18.21■□□□□ 0.51
DDX54-207ENST00000550016 ANKRD37Q7Z713 158 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 NUDCD3Q8IVD9 361 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 ZNF595Q8IYB9 648 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 GBP7Q8N8V2 638 aaPredicted RBP18.21■□□□□ 0.51
DDX54-207ENST00000550016 TLCD1Q96CP7 247 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 PTCHD1Q96NR3 888 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 MAPKAP1Q9BPZ7 522 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 ZNF717Q9BY31 904 aaPredicted RBP18.21■□□□□ 0.51
DDX54-207ENST00000550016 ZNF700Q9H0M5 742 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 PRDM9Q9NQV7 894 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 MMACHCQ9Y4U1 282 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 SPACA6W5XKT8 324 aa18.21■□□□□ 0.51
DDX54-207ENST00000550016 IGHV1-45A0A0A0MS14 117 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 NSG1A0A0A6YYJ2 146 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 SERTM1A2A2V5 107 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 BIRC5O15392 142 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 EEDO75530 441 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 CEACAM4O75871 244 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 DHRS4L1P0CG22 281 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 UROSP10746 265 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 COX6A1P12074 109 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 FOXA1P55317 472 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 HSD17B7P56937 341 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 SOX8P57073 446 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 MAGOHP61326 146 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 EEF1A2Q05639 463 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 AGBL2Q5U5Z8 902 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 CYP20A1Q6UW02 462 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 PAGE2Q7Z2X7 111 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 METTL4Q8N3J2 472 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 FAM47BQ8NA70 645 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 BBC3Q96PG8 261 aaPredicted RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 HBEGFQ99075 208 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 MRPL1Q9BYD6 325 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 SHCBP1LQ9BZQ2 653 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 VIPAS39Q9H9C1 493 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 EML4Q9HC35 981 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 TNFRSF12AQ9NP84 129 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 PRTFDC1Q9NRG1 225 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 MS4A12Q9NXJ0 267 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 VPS29Q9UBQ0 182 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 PHF11Q9UIL8 331 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 ADAM29Q9UKF5 820 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 RALYQ9UKM9 306 aaKnown RBP18.2■□□□□ 0.5
DDX54-207ENST00000550016 FBXW2Q9UKT8 454 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 ATRXP46100 2492 aa18.2■□□□□ 0.5
DDX54-207ENST00000550016 A0A0A6YYD5 115 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 BLACEA4D250 179 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 A6NL46 340 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 MASP2O00187 686 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 MAOAP21397 527 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 CPN2P22792 545 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 SERPINB5P36952 375 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 HTR6P50406 440 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 HNRNPFP52597 415 aaKnown RBP18.19■□□□□ 0.5
DDX54-207ENST00000550016 GALNT1Q10472 559 aaPredicted RBP18.19■□□□□ 0.5
DDX54-207ENST00000550016 PCOLCEQ15113 449 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 MRM1Q6IN84 353 aaKnown RBP18.19■□□□□ 0.5
DDX54-207ENST00000550016 ZCCHC23Q6ZST2 131 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 GPR180Q86V85 440 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 NUDT13Q86X67 352 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 GALNT16Q8N428 558 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 TMEM52Q8NDY8 209 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 OR6Y1Q8NGX8 325 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 SLC39A7Q92504 469 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 TSLPQ969D9 159 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 ABHD17AQ96GS6 310 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 CSF3RQ99062 836 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 SLC25A23Q9BV35 468 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 ZNF160Q9HCG1 818 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 NECTIN3Q9NQS3 549 aa18.19■□□□□ 0.5
DDX54-207ENST00000550016 RIC8BQ9NVN3 520 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms