RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SSR4P51571 173 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 IL2P60568 153 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 PPIAP62937 165 aaKnown RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 BTN3A2P78410 334 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 PDAP1Q13442 181 aaKnown RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 RUNX2Q13950 521 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 HECTD2Q5U5R9 776 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 TMEM211Q6ICI0 200 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 NIPAL1Q6NVV3 410 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 NXPE4Q6UWF7 544 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 CLNKQ7Z7G1 428 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 THOC6Q86W42 341 aaKnown RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 CNTN4Q8IWV2 1026 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 ANKHD1Q8IWZ3 2542 aaKnown RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 TBC1D19Q8N5T2 526 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 GPATCH11Q8N954 259 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 FAM47BQ8NA70 645 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 ARMC2Q8NEN0 867 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 OR2M7Q8NG81 312 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 VMP1Q96GC9 406 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 KRT12Q99456 494 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 ZNF407Q9C0G0 2248 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 TIMMDC1Q9NPL8 285 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 PPIEQ9UNP9 301 aaKnown RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 ERVK-11Q9UQG0 969 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 SLC22A14Q9Y267 594 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 MMACHCQ9Y4U1 282 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 PABPN1LA6NDY0 278 aaKnown RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 HOXD4P09016 255 aaPredicted RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 HNRNPH1P31943 449 aaKnown RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 SOX3P41225 446 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 FNTAP49354 379 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 IST1P53990 364 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 MYBPHQ13203 477 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 SNTB1Q13884 538 aaKnown RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 TERF2Q15554 542 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 RNASEH2BQ5TBB1 312 aaKnown RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 ADNP2Q6IQ32 1131 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 CCDC137Q6PK04 289 aaKnown RBP15.29■□□□□ 0.04
SSH1-208ENST00000548522 KIAA0408Q6ZU52 694 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 CSF3RQ99062 836 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 AIF1LQ9BQI0 150 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 TTTY12Q9BZ98 90 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 ZDHHC11Q9H8X9 412 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 PELI2Q9HAT8 420 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 PRTFDC1Q9NRG1 225 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 KCNN3Q9UGI6 736 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 DYRK1BQ9Y463 629 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 FAM215AQ9Y5M1 114 aa15.29■□□□□ 0.04
SSH1-208ENST00000548522 NPEPPSL1A6NEC2 478 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 A8MVJ9 347 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 FOXO6A8MYZ6 492 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 WWP2O00308 870 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 CDC7O00311 574 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 RAD51CO43502 376 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 ZNF354AO60765 605 aaPredicted RBP15.28■□□□□ 0.04
SSH1-208ENST00000548522 SERPINA6P08185 405 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 CELA3AP09093 270 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 SAT1P21673 171 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 DLX5P56178 289 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 PLGLB1Q02325 96 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 ZNF460Q14592 562 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 GXYLT1Q4G148 440 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 RTL6Q6ICC9 239 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
SSH1-208ENST00000548522 IL20RBQ6UXL0 311 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 LIX1LQ8IVB5 337 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 PPIL6Q8IXY8 311 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 ZNF321PQ8N8H1 164 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 TRPV3Q8NET8 790 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 ATL1Q8WXF7 558 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 SLCO2A1Q92959 643 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 CERS2Q96G23 380 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 RASL10BQ96S79 203 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 SMC6Q96SB8 1091 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 WDR83Q9BRX9 315 aaKnown RBP15.28■□□□□ 0.04
SSH1-208ENST00000548522 TMUB1Q9BVT8 246 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 LIME1Q9H400 295 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 CLK4Q9HAZ1 481 aaKnown RBP15.28■□□□□ 0.04
SSH1-208ENST00000548522 HPF1Q9NWY4 346 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 L3MBTL1Q9Y468 752 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 DNAJC13O75165 2243 aa15.28■□□□□ 0.04
SSH1-208ENST00000548522 PRRC2AP48634 2157 aaKnown RBP15.28■□□□□ 0.04
SSH1-208ENST00000548522 A0A0G2JNJ9 132 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 URADA6NGE7 173 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 ERI3O43414 337 aaKnown RBP15.27■□□□□ 0.04
SSH1-208ENST00000548522 KLK8O60259 260 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 ZFAND5O76080 213 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 GLSO94925 669 aaPredicted RBP15.27■□□□□ 0.04
SSH1-208ENST00000548522 ZWINTO95229 277 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 TBX6O95947 436 aaPredicted RBP15.27■□□□□ 0.04
SSH1-208ENST00000548522 ENO2P09104 434 aaPredicted RBP15.27■□□□□ 0.04
SSH1-208ENST00000548522 GLI4P10075 376 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 ACVR2AP27037 513 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 ADH7P40394 386 aa15.27■□□□□ 0.04
SSH1-208ENST00000548522 MAGEA5P43359 124 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms