RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 HIST2H2ACQ16777 129 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 KBTBD12Q3ZCT8 623 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GRTP1Q5TC63 336 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PRAMEF9Q5VWM5 478 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 HIST2H2AA3Q6FI13 130 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ADNP2Q6IQ32 1131 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 MTFR2Q6P444 385 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TRIM40Q6P9F5 258 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SYT10Q6XYQ8 523 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 C16orf47Q6ZP98 133 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CYS1Q717R9 158 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 VN1R5Q7Z5H4 357 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SPPL2CQ8IUH8 684 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SLC34A3Q8N130 599 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 LGI4Q8N135 537 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM156Q8N614 296 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CPSF7Q8N684 471 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FAM47BQ8NA70 645 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FAM98AQ8NCA5 519 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM52Q8NDY8 209 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 NFAM1Q8NET5 270 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 OR2L5Q8NG80 312 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FBXO25Q8TCJ0 367 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ITLN2Q8WWU7 325 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GAL3ST3Q96A11 431 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 KIAA1191Q96A73 305 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM125Q96AQ2 219 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PTCD3Q96EY7 689 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 MAGED4Q96JG8 741 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PDLIM2Q96JY6 352 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GPR137Q96N19 417 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GPR22Q99680 433 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM79Q9BSE2 394 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 NPLQ9BXD5 320 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ALG9Q9H6U8 611 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 NT5DC2Q9H857 520 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 COPS7BQ9H9Q2 264 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TINAGQ9UJW2 476 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PTBP2Q9UKA9 531 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PCDHGB6Q9Y5F9 930 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ESPL1Q14674 2120 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ASPDHA6ND91 283 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SUPT3HB4E1H0 165 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 KLRC4-KLRK1H3BQV0 150 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TGFBR3LH3BV60 316 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CYR61O00622 381 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 HNRNPRO43390 633 aaKnown RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PEX1O43933 1283 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 NME2P1O60361 137 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CTNSO60931 367 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SUPT3HO75486 399 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ITGA10O75578 1167 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ZFAND5O76080 213 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PDE9AO76083 593 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TBX6O95947 436 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TGFB1P01137 390 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 GSTA2P09210 222 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PRF1P14222 555 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ABOP16442 354 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TFEBP19484 476 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CD22P20273 847 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 NME2P22392 152 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CERS1P27544 350 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 GSTM2P28161 218 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 HTR1EP28566 365 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 HPDP32754 393 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TRHRP34981 398 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 RFC3P40938 356 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MSH2P43246 934 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MTTPP55157 894 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 LIM2P55344 173 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 HSD17B7P56937 341 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 RAB38P57729 211 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 GPR85P60893 370 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ETF1P62495 437 aaKnown RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SLC7A5Q01650 507 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ID2Q02363 134 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CAV1Q03135 178 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TGM3Q08188 693 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 STX4Q12846 297 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 DLG1Q12959 904 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ART3Q13508 389 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 LAPTM5Q13571 262 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 RCN2Q14257 317 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 NAA30Q147X3 362 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SLMAPQ14BN4 828 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PDK4Q16654 411 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PAGE2BQ5JRK9 111 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CDKL4Q5MAI5 379 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MROH9Q5TGP6 573 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ABHD17CQ6PCB6 329 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 C3P1Q6ZMU1 363 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MDGA2Q7Z553 956 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 UBE3DQ7Z6J8 389 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CMC1Q7Z7K0 106 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 TBC1D1Q86TI0 1168 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ISCA2Q86U28 154 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF227Q86WZ6 799 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms