RNA–Protein interactions for RNA: ENST00000547476.5

TUBA1B-203, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-203ENST00000547476 DEFB134Q4QY38 66 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 CTSL3PQ5NE16 218 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 CAPN13Q6MZZ7 669 aaPredicted RBP10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 GSPT2Q8IYD1 628 aaKnown RBP10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 ZNF740Q8NDX6 193 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 NCLNQ969V3 563 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 NECTIN3Q9NQS3 549 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 SACM1LQ9NTJ5 587 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 ZNF223Q9UK11 482 aaPredicted RBP10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 EIF3LQ9Y262 564 aaKnown RBP10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 PCDHGB3Q9Y5G1 929 aa10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.78□□□□□ -0.68
TUBA1B-203ENST00000547476 IGKV3D-11A0A0A0MRZ8 115 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 MBD3L4A6NDZ8 208 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 FAM187AA6NFU0 413 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 MBD3L5A6NJ08 208 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 PSMD12O00232 456 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 CLDN4O14493 209 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 CASKO14936 926 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 POLR3GO15318 223 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 NDUFS4O43181 175 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 PRKNO60260 465 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 ZFAND5O76080 213 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 B3GALT4O96024 378 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 FGGP02679 453 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 CHRM3P20309 590 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 GRK3P35626 688 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 ZNF136P52737 540 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 COPS2P61201 443 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 GUCY2DQ02846 1103 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 GBX1Q14549 363 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 KCNJ11Q14654 390 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 ACSBG2Q5FVE4 666 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 XKR6Q5GH73 641 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 HECTD2Q5U5R9 776 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 KIAA0930Q6ICG6 404 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 POMZP3Q6PJE2 187 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 PPP1R21Q6ZMI0 780 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 RTL4Q6ZR62 310 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 KLHL7Q8IXQ5 586 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 LRRC56Q8IYG6 542 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 OTUD6BQ8N6M0 293 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 FAM71DQ8N9W8 422 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 SREK1Q8WXA9 508 aaKnown RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 KRT35Q92764 455 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 RUNDC3BQ96NL0 473 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 DACH2Q96NX9 599 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 RASL10BQ96S79 203 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 AARSD1Q9BTE6 412 aaKnown RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 OSBPL8Q9BZF1 889 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 CCDC177Q9NQR7 707 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 PNO1Q9NRX1 252 aaKnown RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 TUBA8Q9NY65 449 aaPredicted RBP10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 TCAF1Q9Y4C2 921 aa10.77□□□□□ -0.69
TUBA1B-203ENST00000547476 SH3D21A4FU49 640 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 KDM4EB2RXH2 506 aaPredicted RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 WWP2O00308 870 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 LCMT2O60294 686 aaKnown RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 EPPINO95925 133 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 P04436 131 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 SERPIND1P05546 499 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 NID1P14543 1247 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 ALOX12P18054 663 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 FMO4P31512 558 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 TIMP3P35625 211 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 AGFG1P52594 562 aaKnown RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 TBPL1P62380 186 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 FOXO1Q12778 655 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 SIX1Q15475 284 aaPredicted RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 HYAL4Q2M3T9 481 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 ACSF3Q4G176 576 aaPredicted RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 NIPAL1Q6NVV3 410 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 LACC1Q8IV20 430 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 LIX1Q8N485 282 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 AFAP1L2Q8N4X5 818 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 PPHLN1Q8NEY8 458 aaKnown RBP10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 ALG3Q92685 438 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 PEX13Q92968 403 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 HSPBAP1Q96EW2 488 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 SCYL1Q96KG9 808 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 PKNOX2Q96KN3 472 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 RHBGQ9H310 441 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 MYOTQ9UBF9 498 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
TUBA1B-203ENST00000547476 E5RI56 91 aa10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 AVILO75366 819 aa10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 ZNF888P0CJ79 500 aaPredicted RBP10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 FPR1P21462 350 aa10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 IMPA1P29218 277 aa10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 GDF10P55107 478 aa10.75□□□□□ -0.69
TUBA1B-203ENST00000547476 MRPS25P82663 173 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms