RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ANXA2P2A6NMY6 339 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 H0Y9J4 135 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FLRT2O43155 660 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FIBPO43427 364 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FRAT2O75474 233 aaPredicted RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 MOCS2O96007 188 aaPredicted RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 PIGRP01833 764 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FASP25445 335 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 PEX3P56589 373 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 NUCB1Q02818 461 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 RBBP4Q09028 425 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FASTKQ14296 549 aaKnown RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 PPA1Q15181 289 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 TTC31Q49AM3 519 aaPredicted RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 CGB2Q6NT52 195 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 NEPROQ6NW34 567 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 SLC27A4Q6P1M0 643 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 ARMCX5Q6P1M9 558 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF600Q6ZNG1 722 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 NUFIP2Q7Z417 695 aaKnown RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 VASH2Q86V25 355 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 TBC1D10CQ8IV04 446 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 NAXDQ8IW45 347 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 PHYHIPLQ96FC7 376 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 AK8Q96MA6 479 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 RAB3IPQ96QF0 476 aaPredicted RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 TMX4Q9H1E5 349 aaPredicted RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 OR10A4Q9H209 315 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 PNNQ9H307 717 aaKnown RBP2.87□□□□□ -1.95
CCDC38-204ENST00000546816 LIME1Q9H400 295 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 MGAT4AQ9UM21 535 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 FOXI3A8MTJ6 420 aaPredicted RBP2.86□□□□□ -1.95
CCDC38-204ENST00000546816 P2RX6O15547 441 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 FCGR3BO75015 233 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 FGF19O95750 216 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 DNTTP04053 509 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 SP9P0CG40 484 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 LBPP18428 481 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 IST1P53990 364 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 CDO1Q16878 200 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 KRBOX4Q5JUW0 171 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 C17orf107Q6ZR85 190 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 SLC43A2Q8N370 569 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 CCDC89Q8N998 374 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 IQUBQ8NA54 791 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 CCDC191Q8NCU4 936 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 GTSF1Q8WW33 167 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 CNDP2Q96KP4 475 aaKnown RBP2.86□□□□□ -1.95
CCDC38-204ENST00000546816 ANKRD27Q96NW4 1050 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 TSSK2Q96PF2 358 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 SERINC2Q96SA4 455 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 SP140LQ9H930 580 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 TMOD3Q9NYL9 352 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 CFDP1Q9UEE9 299 aaPredicted RBP2.86□□□□□ -1.95
CCDC38-204ENST00000546816 PCDHGA1Q9Y5H4 931 aa2.86□□□□□ -1.95
CCDC38-204ENST00000546816 TMEM129A0AVI4 362 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 PPIP5K2O43314 1243 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 DKC1O60832 514 aaKnown RBP eCLIP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 TSC22D2O75157 780 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 SIX3O95343 332 aaPredicted RBP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ANKRD34CP0C6C1 535 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 MGMTP16455 207 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 PTAFRP25105 342 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF41P51814 821 aaPredicted RBP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 PTENP60484 403 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 CAMK2DQ13557 499 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 FAM46CQ5VWP2 391 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 PLPP4Q5VZY2 271 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 RFPL4BQ6ZWI9 263 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 PRR22Q8IZ63 422 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 TDHQ8IZJ6 230 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 OR8H2Q8N162 312 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 CCAR2Q8N163 923 aaKnown RBP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF781Q8N8C0 355 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 OR6F1Q8NGZ6 308 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 SLC35C1Q96A29 364 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ESAMQ96AP7 390 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 NTNG2Q96CW9 530 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ERO1AQ96HE7 468 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 BAG1Q99933 345 aaPredicted RBP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 NACAP1Q9BZK3 213 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 LMAN1LQ9HAT1 526 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 FBXO7Q9Y3I1 522 aa2.85□□□□□ -1.95
CCDC38-204ENST00000546816 HBS1LQ9Y450 684 aaKnown RBP2.85□□□□□ -1.95
CCDC38-204ENST00000546816 KLF18A0A0U1RQI7 1052 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF724A8MTY0 619 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 E7ENQ6 273 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 HDAC3O15379 428 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 ACSL4O60488 711 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 PGLSO95336 258 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 HSP90AA1P07900 732 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 SRD5A2P31213 254 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 KRT20P35900 424 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 CRKLP46109 303 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 SLC1A6P48664 564 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 HNRNPA3P51991 378 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 ADARP55265 1226 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 TOMM20Q15388 145 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms