RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ABHD11Q8NFV4 315 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 ZFP90Q8TF47 636 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 UBE2FQ969M7 185 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 HSH2DQ96JZ2 352 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 HSPA12BQ96MM6 686 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 DCAF13Q9NV06 445 aaKnown RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 WSB2Q9NYS7 404 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-202ENST00000546386 CPNE7Q9UBL6 633 aa11.37□□□□□ -0.59
CCDC38-202ENST00000546386 C1orf226A1L170 272 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 M0QX08 132 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 HS6ST1O60243 411 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 BCKDHBP21953 392 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ELK4P28324 431 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 GPC1P35052 558 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 PIGAP37287 484 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MRPL19P49406 292 aaKnown RBP11.36□□□□□ -0.59
CCDC38-202ENST00000546386 FBXO42Q6P3S6 717 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 FAM92BQ6ZTR7 304 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MEX3DQ86XN8 651 aaKnown RBP11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ZDHHC21Q8IVQ6 265 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ACOT4Q8N9L9 421 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MAPKAP1Q9BPZ7 522 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 RSPO3Q9BXY4 272 aaPredicted RBP11.36□□□□□ -0.59
CCDC38-202ENST00000546386 FAM60AQ9NP50 221 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 TMEM184CQ9NVA4 438 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 UCKL1Q9NWZ5 548 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 TESMINQ9Y4I5 508 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 COLEC10Q9Y6Z7 277 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 NPIPB8E9PQR5 432 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 G3V2T6 193 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 LDB3O75112 727 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 RAP2AP10114 183 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ERGP11308 486 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 BMP2P12643 396 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 PAX7P23759 505 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ALDH4A1P30038 563 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 CD6P30203 668 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 KDELR2P33947 212 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 GRK3P35626 688 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MVDP53602 400 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 FOXL2P58012 376 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 SIM2Q14190 667 aaPredicted RBP11.36□□□□□ -0.59
CCDC38-202ENST00000546386 SMAD2Q15796 467 aaKnown RBP11.36□□□□□ -0.59
CCDC38-202ENST00000546386 ZIC1Q15915 447 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 NHSL2Q5HYW2 709 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 PRR23CQ6ZRP0 262 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 OR2L8Q8NGY9 312 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 LMX1AQ8TE12 382 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 XAGE5Q8WWM1 108 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 TMIGD2Q96BF3 282 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MS4A6EQ96DS6 147 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 TRIM4Q9C037 500 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 EHD1Q9H4M9 534 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 KIR3DX1Q9H7L2 352 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 TRPC4Q9UBN4 977 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 MAN2B2Q9Y2E5 1009 aa11.36□□□□□ -0.59
CCDC38-202ENST00000546386 IGHV1OR15-9A0A0B4J2B8 117 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 DYTNA2CJ06 578 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CCDC160A6NGH7 325 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CAPN5O15484 640 aaPredicted RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 NDUFS2O75306 463 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 NTN1O95631 604 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 NPPAP01160 153 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 BCHEP06276 602 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 GPIP06744 558 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 UGT2B7P16662 529 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 PIK3CBP42338 1070 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 ASMTP46597 345 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CHN2P52757 468 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 REEP5Q00765 189 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 DBPQ10586 325 aaPredicted RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 SFSWAPQ12872 951 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 ERV3-1Q14264 604 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 OR52E8Q6IFG1 317 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 GALNT18Q6P9A2 607 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 KLHL17Q6TDP4 642 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 TMEM107Q6UX40 140 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CEACAM20Q6UY09 585 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 VN1R4Q7Z5H5 301 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 C11orf74Q86VG3 221 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 RBM45Q8IUH3 476 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 PARP8Q8N3A8 854 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 RAB42Q8N4Z0 105 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 HORMAD2Q8N7B1 307 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 RGMAQ96B86 450 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 COQ8BQ96D53 544 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 WDR34Q96EX3 536 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 C16orf58Q96GQ5 468 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 CSF3RQ99062 836 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 VCXQ9H320 206 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 FAM120CQ9NX05 1096 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 TAS2R9Q9NYW1 312 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 KCNE3Q9Y6H6 103 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 FAM58BPP0C7Q3 252 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms