RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RNASET2O00584 256 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 PLD2O14939 933 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 POLR1CO15160 346 aaPredicted RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 STC2O76061 302 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 LGI1O95970 557 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 IFNA14P01570 189 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 C1QBP02746 253 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 CLEC2LP0C7M8 214 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 OR56A5P0C7T3 313 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 SSTR4P31391 388 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 FEN1P39748 380 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 MAP2K3P46734 347 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 MVDP53602 400 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 PFN3P60673 137 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 SNRPGP62308 76 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 RAE1P78406 368 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 MADCAM1Q13477 382 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 HSDL2Q6YN16 418 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ZNF767PQ75MW2 155 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 PHC2Q8IXK0 858 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 GPR65Q8IYL9 337 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 NANOGP1Q8N7R0 232 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 OR52N2Q8NGI0 321 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 FAM193BQ96PV7 902 aaPredicted RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 C19orf43Q9BQ61 176 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ING3Q9NXR8 418 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 RPL36Q9Y3U8 105 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 SNX11Q9Y5W9 270 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ALG5Q9Y673 324 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.23
SRP54-202ENST00000546080 GNG14A0A1W2PPG7 69 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 UGDHO60701 494 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 C1SP09871 688 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 PSKH1P11801 424 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 RHCEP18577 417 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 CDK6Q00534 326 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ZNF91Q05481 1191 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 LRRC74AQ0VAA2 488 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 CDKN3Q16667 212 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ADGRF1Q5T601 910 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TRIQKQ629K1 86 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 C22orf42Q6IC83 251 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 VRK3Q8IV63 474 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 GPR26Q8NDV2 337 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 C19orf18Q8NEA5 215 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 PROKR2Q8NFJ6 384 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 NLGN4YQ8NFZ3 816 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 NELL2Q99435 816 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 DHRS9Q9BPW9 319 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ZNF717Q9BY31 904 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 PLEKHB1Q9UF11 243 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 ZNF106Q9H2Y7 1883 aaKnown RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TRBC2A0A5B9 178 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 E7EQ34 232 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 FAM227AF5H4B4 570 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 K7ERQ8 282 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 COCHO43405 550 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 NOS1APO75052 506 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 OR2B3O76000 313 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 VNN2O95498 520 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 IFNW1P05000 195 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 MPC1LP0DKB6 136 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 OSMP13725 252 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ALAS2P22557 587 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 GKP32189 559 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 HBA1P69905 142 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TARDBPQ13148 414 aaKnown RBP eCLIP13.58□□□□□ -0.24
SRP54-202ENST00000546080 SP140Q13342 867 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.58□□□□□ -0.242e-6■■□□□ 13.9
SRP54-202ENST00000546080 CLLU1OSQ5K130 101 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TMEM201Q5SNT2 666 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ZNF783Q6ZMS7 281 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 OXR1Q8N573 874 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ATP6V1C2Q8NEY4 427 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 GPR156Q8NFN8 814 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 METTL2AQ96IZ6 378 aaKnown RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 COQ7Q99807 217 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TSSK6Q9BXA6 273 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 UCK2Q9BZX2 261 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 RERGLQ9H628 205 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TMEM38AQ9H6F2 299 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ANKRA2Q9H9E1 313 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TEKT2Q9UIF3 430 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 ACSL6Q9UKU0 697 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 TMCC3Q9ULS5 477 aa13.58□□□□□ -0.24
SRP54-202ENST00000546080 NDRG2Q9UN36 371 aaKnown RBP13.58□□□□□ -0.24
SRP54-202ENST00000546080 ALPK3Q96L96 1907 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 TBL1XO60907 577 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms